RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 KMT5BQ4FZB7 885 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 RALYLQ86SE5 291 aaKnown RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 CEP57L1Q8IYX8 460 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 RTFDC1Q9BY42 306 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 NACAP1Q9BZK3 213 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 A1CFQ9NQ94 594 aaKnown RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 MYH2Q9UKX2 1941 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 IPO5O00410 1097 aaKnown RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 USP8P40818 1118 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 TGFB2P61812 414 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 C11orf57Q6ZUT1 292 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 PODNQ7Z5L7 613 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 CCAR2Q8N163 923 aaKnown RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 LSM14AQ8ND56 463 aaKnown RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 ZNF483Q8TF39 744 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 DYNLL2Q96FJ2 89 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 CRACR2AQ9BSW2 395 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 DAGLAQ9Y4D2 1042 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 MROH7-TTC4A0A0A0MT08 1334 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 PRC1O43663 620 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 JAK2O60674 1132 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 PPARAQ07869 468 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 SLC44A5Q8NCS7 719 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 C17orf50Q8WW18 174 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 LLPHQ9BRT6 129 aaKnown RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 MYL10Q9BUA6 226 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 FHDC1Q9C0D6 1143 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 UTP6Q9NYH9 597 aaKnown RBP9.59□□□□□ -0.87
HDAC9-219ENST00000461159 ZSWIM5Q9P217 1185 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 IMPACTQ9P2X3 320 aa9.59□□□□□ -0.87
HDAC9-219ENST00000461159 PDS5AQ29RF7 1337 aaKnown RBP9.58□□□□□ -0.88
HDAC9-219ENST00000461159 FAM205AQ6ZU69 1335 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 USP27XA6NNY8 438 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 TUBB4AP04350 444 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 PLCD1P51178 756 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 CCZ1BP86790 482 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 CCZ1P86791 482 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-219ENST00000461159 CCDC15Q0P6D6 951 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 SCRN1Q12765 414 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 IFT88Q13099 833 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 ALX1Q15699 326 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 LONRF3Q496Y0 759 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 MFSD6Q6ZSS7 791 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 NCOA7Q8NI08 942 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 CRNKL1Q9BZJ0 848 aaKnown RBP9.58□□□□□ -0.88
HDAC9-219ENST00000461159 RCOR1Q9UKL0 485 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 COL4A5P29400 1685 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 CCDC88AQ3V6T2 1871 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 SHTN1A0MZ66 631 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 NFKBIEO00221 500 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 RANBP6O60518 1105 aaKnown RBP9.58□□□□□ -0.88
HDAC9-219ENST00000461159 GNAT2P19087 354 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 PRPHP41219 470 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 FOSBP53539 338 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 TCP10Q12799 353 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 ARID5BQ14865 1188 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 ELF2Q15723 593 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 FAM47AQ5JRC9 791 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 DACT2Q5SW24 774 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 FBXO38Q6PIJ6 1188 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 RTKN2Q8IZC4 609 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 AGXT2Q9BYV1 514 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 TRIM6Q9C030 488 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-219ENST00000461159 SPON1Q9HCB6 807 aa9.58□□□□□ -0.88
HDAC9-219ENST00000461159 TRMT1Q9NXH9 659 aaKnown RBP9.58□□□□□ -0.88
HDAC9-219ENST00000461159 SNED1Q8TER0 1413 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 PSMD14O00487 310 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 NMT2O60551 498 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 SNUPNO95149 360 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 BAG3O95817 575 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 PRELPP51888 382 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 FAM160A1Q05DH4 1040 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 NFIAQ12857 509 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 SNW1Q13573 536 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 ZRSR1Q15695 479 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 CCDC150Q8NCX0 1101 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 ARMC2Q8NEN0 867 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 GIMAP7Q8NHV1 300 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 DDX11Q96FC9 970 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 BAZ2BQ9UIF8 2168 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 CTDNEP1O95476 244 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 CEBPZQ03701 1054 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 DHX40Q8IX18 779 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 OSBPL5Q9H0X9 879 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 TAOK3Q9H2K8 898 aa9.57□□□□□ -0.88
HDAC9-219ENST00000461159 DDX4Q9NQI0 724 aaKnown RBP9.57□□□□□ -0.88
HDAC9-219ENST00000461159 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms