RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CDK7P50613 346 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 AAK1Q2M2I8 961 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 CCSAPQ6IQ19 270 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-202ENST00000461127 CLEC10AQ8IUN9 316 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 CLUAP1Q96AJ1 413 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 CCDC17Q96LX7 622 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 PPP1R12CQ9BZL4 782 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 DCP1AQ9NPI6 582 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-202ENST00000461127 CXXC1Q9P0U4 656 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-202ENST00000461127 ZHX1Q9UKY1 873 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-202ENST00000461127 CHD9Q3L8U1 2897 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 ARVCFO00192 962 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 CST5P28325 142 aaPredicted RBP20.78■□□□□ 0.92
TOP3A-202ENST00000461127 EVX2Q03828 476 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 SLC9C2Q5TAH2 1124 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 SIAH1Q8IUQ4 282 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 DDX11Q96FC9 970 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 NKX2-4Q9H2Z4 354 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 FBXO28Q9NVF7 368 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 PPP1R9AQ9ULJ8 1098 aa20.78■□□□□ 0.92
TOP3A-202ENST00000461127 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
TOP3A-202ENST00000461127 ASGR1P07306 291 aa20.77■□□□□ 0.92
TOP3A-202ENST00000461127 AKR1B1P15121 316 aa20.77■□□□□ 0.92
TOP3A-202ENST00000461127 HOXD11P31277 338 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-202ENST00000461127 AMOTL1Q8IY63 956 aa20.77■□□□□ 0.92
TOP3A-202ENST00000461127 SDR42E1Q8WUS8 393 aa20.77■□□□□ 0.92
TOP3A-202ENST00000461127 HERVK_113Q902F9 699 aa20.77■□□□□ 0.92
TOP3A-202ENST00000461127 IL23AQ9NPF7 189 aa20.77■□□□□ 0.92
TOP3A-202ENST00000461127 ZNF214Q9UL59 606 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-202ENST00000461127 RAD21O60216 631 aa20.76■□□□□ 0.91
TOP3A-202ENST00000461127 SNAI1O95863 264 aaPredicted RBP20.76■□□□□ 0.91
TOP3A-202ENST00000461127 FGBP02675 491 aa20.76■□□□□ 0.91
TOP3A-202ENST00000461127 PDE6AP16499 860 aa20.76■□□□□ 0.91
TOP3A-202ENST00000461127 MAMDC4Q6UXC1 1216 aa20.76■□□□□ 0.91
TOP3A-202ENST00000461127 DYNLL2Q96FJ2 89 aa20.76■□□□□ 0.91
TOP3A-202ENST00000461127 HCN4Q9Y3Q4 1203 aa20.76■□□□□ 0.91
TOP3A-202ENST00000461127 TCF20Q9UGU0 1960 aaKnown RBP20.76■□□□□ 0.91
TOP3A-202ENST00000461127 MYADML2A6NDP7 307 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 CYP2D6P10635 497 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 GNASQ5JWF2 1037 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 FAM126BQ8IXS8 530 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 MICALL1Q8N3F8 863 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 TEX13BQ9BXU2 312 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 KANSL2Q9H9L4 492 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 TNNQ9UQP3 1299 aa20.75■□□□□ 0.91
TOP3A-202ENST00000461127 ARIH1Q9Y4X5 557 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-202ENST00000461127 EEF2P13639 858 aaKnown RBP20.74■□□□□ 0.91
TOP3A-202ENST00000461127 ACVR2BQ13705 512 aa20.74■□□□□ 0.91
TOP3A-202ENST00000461127 ZNF467Q7Z7K2 595 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-202ENST00000461127 AACSQ86V21 672 aa20.74■□□□□ 0.91
TOP3A-202ENST00000461127 TMEM57Q8N5G2 664 aa20.74■□□□□ 0.91
TOP3A-202ENST00000461127 NECAB3Q96P71 396 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-202ENST00000461127 ABHD16BQ9H3Z7 469 aa20.74■□□□□ 0.91
TOP3A-202ENST00000461127 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
TOP3A-202ENST00000461127 BMP1P13497 986 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 CYP2C18P33260 490 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 GJA9P57773 515 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 SKIV2LQ15477 1246 aaKnown RBP20.73■□□□□ 0.91
TOP3A-202ENST00000461127 FAM83BQ5T0W9 1011 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 PPP2R2DQ66LE6 453 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 SNRNP48Q6IEG0 339 aaKnown RBP20.73■□□□□ 0.91
TOP3A-202ENST00000461127 ERC1Q8IUD2 1116 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 LCORLQ8N3X6 602 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 UPF3AQ9H1J1 476 aaKnown RBP20.73■□□□□ 0.91
TOP3A-202ENST00000461127 ATP8A2Q9NTI2 1148 aa20.73■□□□□ 0.91
TOP3A-202ENST00000461127 YBX2Q9Y2T7 364 aaKnown RBP20.73■□□□□ 0.91
TOP3A-202ENST00000461127 CDK8P49336 464 aa20.72■□□□□ 0.91
TOP3A-202ENST00000461127 CCDC144BQ3MJ40 725 aa20.72■□□□□ 0.91
TOP3A-202ENST00000461127 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
TOP3A-202ENST00000461127 HIPK3Q9H422 1215 aa20.72■□□□□ 0.91
TOP3A-202ENST00000461127 C1orf115Q9H7X2 142 aa20.72■□□□□ 0.91
TOP3A-202ENST00000461127 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-202ENST00000461127 CTDP1Q9Y5B0 961 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-202ENST00000461127 CHD7Q9P2D1 2997 aa20.72■□□□□ 0.91
TOP3A-202ENST00000461127 GBF1Q92538 1859 aa20.71■□□□□ 0.91
TOP3A-202ENST00000461127 DNAJC25-GNG10A0A024R161 153 aa20.71■□□□□ 0.91
TOP3A-202ENST00000461127 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
TOP3A-202ENST00000461127 OTOP2Q7RTS6 562 aa20.71■□□□□ 0.91
TOP3A-202ENST00000461127 DDRGK1Q96HY6 314 aa20.71■□□□□ 0.91
TOP3A-202ENST00000461127 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
TOP3A-202ENST00000461127 CD4P01730 458 aa20.7■□□□□ 0.9
TOP3A-202ENST00000461127 SLC4A3P48751 1232 aa20.7■□□□□ 0.9
TOP3A-202ENST00000461127 IRX5P78411 483 aaPredicted RBP20.7■□□□□ 0.9
TOP3A-202ENST00000461127 TFF2Q03403 129 aa20.7■□□□□ 0.9
TOP3A-202ENST00000461127 RPUSD2Q8IZ73 545 aaKnown RBP20.7■□□□□ 0.9
TOP3A-202ENST00000461127 ARMT1Q9H993 441 aa20.7■□□□□ 0.9
TOP3A-202ENST00000461127 ERC2O15083 957 aa20.69■□□□□ 0.9
TOP3A-202ENST00000461127 GTPBP6O43824 516 aaPredicted RBP20.69■□□□□ 0.9
TOP3A-202ENST00000461127 C12orf60Q5U649 245 aa20.69■□□□□ 0.9
TOP3A-202ENST00000461127 ZKSCAN2Q63HK3 967 aa20.69■□□□□ 0.9
TOP3A-202ENST00000461127 C16orf86Q6ZW13 317 aa20.69■□□□□ 0.9
TOP3A-202ENST00000461127 ANKRD35Q8N283 1001 aa20.69■□□□□ 0.9
TOP3A-202ENST00000461127 PCDHA11Q9Y5I1 949 aa20.69■□□□□ 0.9
TOP3A-202ENST00000461127 XIRP2A4UGR9 3374 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 TCRBV5S4A2TA0A5A2 114 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 GOLIM4O00461 696 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 ADCY6O43306 1168 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 ZBED4O75132 1171 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms