RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 CCDC196A0A1B0GTZ2 297 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 CPLX1O14810 134 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 CDC27P30260 824 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.52
UPF2-204ENST00000460569 MAP2K2P36507 400 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 SCRN1Q12765 414 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 PPP2R5BQ15173 497 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
UPF2-204ENST00000460569 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 GTF3C6Q969F1 213 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 SNX21Q969T3 373 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 UBA5Q9GZZ9 404 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 SH2B1Q9NRF2 756 aaPredicted RBP11.83□□□□□ -0.52
UPF2-204ENST00000460569 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 BAZ2BQ9UIF8 2168 aaKnown RBP11.83□□□□□ -0.52
UPF2-204ENST00000460569 MYPNQ86TC9 1320 aa11.83□□□□□ -0.52
UPF2-204ENST00000460569 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 K7ELQ4 463 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 PLA2G6O60733 806 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 CYP2C8P10632 490 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 ADD1P35611 737 aaKnown RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 TM4SF4P48230 202 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 COG2Q14746 738 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 TAF1CQ15572 869 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 CPLX2Q6PUV4 134 aaKnown RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 BTNL9Q6UXG8 535 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 CCDC82Q8N4S0 544 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 SMCR8Q8TEV9 937 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 ATG4CQ96DT6 458 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 ZCCHC17Q9NP64 241 aaKnown RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 PRR12Q9ULL5 1215 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
UPF2-204ENST00000460569 CNTNAP5Q8WYK1 1306 aa11.82□□□□□ -0.52
UPF2-204ENST00000460569 DSG3P32926 999 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 HERVK_113P62684 666 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 ST3GAL1Q11201 340 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 ADGRF4Q8IZF3 695 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 SRBD1Q8N5C6 995 aaKnown RBP11.81□□□□□ -0.52
UPF2-204ENST00000460569 PIBF1Q8WXW3 757 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
UPF2-204ENST00000460569 SPZ1Q9BXG8 430 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 VAT1LQ9HCJ6 419 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
UPF2-204ENST00000460569 RBBP6Q7Z6E9 1792 aaKnown RBP11.81□□□□□ -0.52
UPF2-204ENST00000460569 CYTH3O43739 400 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 CDKL5O76039 1030 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 IFNAR1P17181 557 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 ANP32AP39687 249 aaKnown RBP11.8□□□□□ -0.52
UPF2-204ENST00000460569 SNAP25P60880 206 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 NTRK3Q16288 839 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 CDC37Q16543 378 aaPredicted RBP11.8□□□□□ -0.52
UPF2-204ENST00000460569 SLC35G1Q2M3R5 365 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 GTF3C2Q8WUA4 911 aaPredicted RBP11.8□□□□□ -0.52
UPF2-204ENST00000460569 PHKBQ93100 1093 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 RRP36Q96EU6 259 aaKnown RBP11.8□□□□□ -0.52
UPF2-204ENST00000460569 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 RIOX1Q9H6W3 641 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 JMJD4Q9H9V9 463 aa11.8□□□□□ -0.52
UPF2-204ENST00000460569 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 VWA5AO00534 786 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 DTNBO60941 627 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 ZBED4O75132 1171 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 FDX1P10109 184 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 AKAP17AQ02040 695 aaKnown RBP11.79□□□□□ -0.52
UPF2-204ENST00000460569 FUT2Q10981 343 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 CRHR2Q13324 411 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 BECN1Q14457 450 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 TRIM22Q8IYM9 498 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 MB21D1Q8N884 522 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
UPF2-204ENST00000460569 PIGSQ96S52 555 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
UPF2-204ENST00000460569 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
UPF2-204ENST00000460569 SEC63Q9UGP8 760 aaKnown RBP11.79□□□□□ -0.52
UPF2-204ENST00000460569 ZBTB5O15062 677 aa11.78□□□□□ -0.52
UPF2-204ENST00000460569 CA12O43570 354 aa11.78□□□□□ -0.52
UPF2-204ENST00000460569 JAK2O60674 1132 aa11.78□□□□□ -0.52
UPF2-204ENST00000460569 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
UPF2-204ENST00000460569 CTDNEP1O95476 244 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms