RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GOLGA8KD6RF30 607 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 RPS6KB1P23443 525 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 PEX19P40855 299 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 PIK3AP1Q6ZUJ8 805 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 CHURC1Q8WUH1 139 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 HESX1Q9UBX0 185 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 SMIM24O75264 130 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 TFCP2Q12800 502 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 MAP7D3Q8IWC1 876 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 CABS1Q96KC9 395 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 SLC8A2Q9UPR5 921 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 AK2P54819 239 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 SPZ1Q9BXG8 430 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 TEKT2Q9UIF3 430 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 GAS7O60861 476 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 IGSF3O75054 1194 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 CLSTN2Q9H4D0 955 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 A6NJR5 290 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 TXNDC9O14530 226 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 PPARGP37231 505 aaPredicted RBP9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 ANGPTL3Q9Y5C1 460 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 MYO9BQ13459 2157 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 RIMBP2O15034 1052 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 PDCD7Q8N8D1 485 aaKnown RBP9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 CCHCR1Q8TD31 782 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 JPH2Q9BR39 696 aaPredicted RBP9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 TEX12Q9BXU0 123 aa9.73□□□□□ -0.85
SHROOM4-203ENST00000460112 CDC25BP30305 580 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 BPIFB4P59827 614 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 RBM6P78332 1123 aaKnown RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 AOC3Q16853 763 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 NXNQ6DKJ4 435 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 DPP8Q6V1X1 898 aaPredicted RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 NPATQ14207 1427 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 RAD51AP2Q09MP3 1159 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 TSHZ3Q63HK5 1081 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 PDZD8Q8NEN9 1154 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 NLRP7Q8WX94 980 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 BZW2Q9Y6E2 419 aaKnown RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 STX1BP61266 288 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 MMEL1Q495T6 779 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 ARHGEF16Q5VV41 709 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 DDX21Q9NR30 783 aaKnown RBP eCLIP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 KIF1CO43896 1103 aaKnown RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 CCDC13Q8IYE1 715 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 POMGNT1Q8WZA1 660 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 TSC1Q92574 1164 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 ZBTB40Q9NUA8 1239 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 HNRNPCL2B2RXH8 293 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 HNRNPCL1O60812 293 aaKnown RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 PPP2R5AQ15172 486 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 GLG1Q92896 1179 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 SCYL1Q96KG9 808 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 SLC12A6Q9UHW9 1150 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 PASKQ96RG2 1323 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 IRX5P78411 483 aaPredicted RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 SKA2Q8WVK7 121 aaPredicted RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 NELFBQ8WX92 580 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 RABGGTAQ92696 567 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 SH3TC1Q8TE82 1336 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 NLRP12P59046 1061 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 POSTNQ15063 836 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 LRRC23Q53EV4 343 aaPredicted RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 HERC4Q5GLZ8 1057 aaPredicted RBP9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 RUBCNQ92622 972 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 HDAC11Q96DB2 347 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 MRFAP1L1Q96HT8 127 aa9.72□□□□□ -0.85
SHROOM4-203ENST00000460112 KDM2BQ8NHM5 1336 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 SEPT2Q15019 361 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 LONRF2Q1L5Z9 754 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 PLBD2Q8NHP8 589 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 EFHD1Q9BUP0 239 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 TRIM15Q9C019 465 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 EFCC1Q9HA90 598 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 SAP30BPQ9UHR5 308 aaKnown RBP9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 ARHGEF10O15013 1369 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 ASXL2Q76L83 1435 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 LIG4P49917 911 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 ITKQ08881 620 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 TTLL7Q6ZT98 887 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 RETREG2Q8NC44 543 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 FLAD1Q8NFF5 587 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 EDC4Q6P2E9 1401 aaKnown RBP9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 HIP1RO75146 1068 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 ATP2B4P23634 1241 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 ATP8A2Q9NTI2 1148 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 A2MP01023 1474 aa9.71□□□□□ -0.85
SHROOM4-203ENST00000460112 SYCP2Q9BX26 1530 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms