RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CCDC129Q6ZRS4 1044 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 KLRG1Q96E93 195 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 HHIPL1Q96JK4 782 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 CDK5RAP2Q96SN8 1893 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 PAPPA2Q9BXP8 1791 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 UNCXA6NJT0 531 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 RASSF10A6NK89 507 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 GSG1L2A8MUP6 293 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 SMC2O95347 1197 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 MAP3K9P80192 1104 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 LDLRAD1Q5T700 205 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 MNS1Q8NEH6 495 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 IPO4Q8TEX9 1081 aaKnown RBP17.94■□□□□ 0.46
CMTM3-203ENST00000460097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
CMTM3-203ENST00000460097 FOCADQ5VW36 1801 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
CMTM3-203ENST00000460097 CAPN2P17655 700 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 CMA1P23946 247 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 TUBB4BP68371 445 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 DPCR1Q3MIW9 517 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 ELOA2Q8IYF1 753 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-203ENST00000460097 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 NACAP1Q9BZK3 213 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 ST7Q9NRC1 585 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 HERC5Q9UII4 1024 aaKnown RBP17.93■□□□□ 0.46
CMTM3-203ENST00000460097 TUBE1Q9UJT0 475 aa17.93■□□□□ 0.46
CMTM3-203ENST00000460097 FAM237AA0A1B0GTK4 181 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 PLCD1P51178 756 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 FANCCQ00597 558 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 RGMBQ6NW40 437 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 HOMER1Q86YM7 354 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 AMOTL1Q8IY63 956 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 CRACR2BQ8N4Y2 399 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-203ENST00000460097 IQUBQ8NA54 791 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.92■□□□□ 0.463e-6■■■■□ 21.3
CMTM3-203ENST00000460097 WRNIP1Q96S55 665 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 TRIM34Q9BYJ4 488 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 ZNF112Q9UJU3 913 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 CEP350Q5VT06 3117 aa17.92■□□□□ 0.46
CMTM3-203ENST00000460097 ERICH4A6NGS2 130 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 USP17L21D6R901 530 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 ARHGAP6O43182 974 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 ZNF157P51786 506 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-203ENST00000460097 NDUFA8P51970 172 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 CEBPZQ03701 1054 aaKnown RBP17.91■□□□□ 0.46
CMTM3-203ENST00000460097 PAXIP1Q6ZW49 1069 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-203ENST00000460097 METTL16Q86W50 562 aaKnown RBP17.91■□□□□ 0.46
CMTM3-203ENST00000460097 REXO1L1PQ8IX06 675 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 TDO2P48775 406 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 CTR9Q6PD62 1173 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-203ENST00000460097 STOX1Q6ZVD7 989 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 RABGGTAQ92696 567 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 EXOC4Q96A65 974 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 SLC10A4Q96EP9 437 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 SERPINB13Q9UIV8 391 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 CSADQ9Y600 493 aa17.91■□□□□ 0.46
CMTM3-203ENST00000460097 MYH1P12882 1939 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 FAM196BA6NMK8 535 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 PHF20L1A8MW92 1017 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 PDIA3P30101 505 aaKnown RBP17.9■□□□□ 0.46
CMTM3-203ENST00000460097 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-203ENST00000460097 RSRC2Q7L4I2 434 aaKnown RBP17.9■□□□□ 0.46
CMTM3-203ENST00000460097 VSTM4Q8IW00 320 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 LRRN4CLQ8ND94 238 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 CCDC102AQ96A19 550 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 FTOQ9C0B1 505 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM3-203ENST00000460097 EHD4Q9H223 541 aa17.9■□□□□ 0.46
CMTM3-203ENST00000460097 CWC15Q9P013 229 aaKnown RBP17.9■□□□□ 0.46
CMTM3-203ENST00000460097 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-203ENST00000460097 SPTLC2O15270 562 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 DHX16O60231 1041 aaKnown RBP17.89■□□□□ 0.45
CMTM3-203ENST00000460097 TBC1D8O95759 1140 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 CYP2D6P10635 497 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 INPP5BP32019 993 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 ECE1P42892 770 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 STK38Q15208 465 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 SBK1Q52WX2 424 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 C12orf60Q5U649 245 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 CYP4F22Q6NT55 531 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-203ENST00000460097 CLMNQ96JQ2 1002 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 NAPBQ9H115 298 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 EPB41L4AQ9HCS5 686 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-203ENST00000460097 FEZ2Q9UHY8 353 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-203ENST00000460097 HSPD1P10809 573 aaKnown RBP17.89■□□□□ 0.45
CMTM3-203ENST00000460097 MYL5Q02045 173 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 RAD51AP2Q09MP3 1159 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 TUBB2AQ13885 445 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 VGLL4Q14135 290 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 DNAJC5GQ8N7S2 189 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 TUBB2BQ9BVA1 445 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 HSD3B7Q9H2F3 369 aa17.89■□□□□ 0.45
CMTM3-203ENST00000460097 CYP2D7A0A087X1C5 515 aa17.88■□□□□ 0.45
CMTM3-203ENST00000460097 MINDY4BA8MYZ0 360 aa17.88■□□□□ 0.45
CMTM3-203ENST00000460097 CTNND1O60716 968 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms