RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 ARHGEF6Q15052 776 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 SYNE3Q6ZMZ3 975 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 Q6ZUG5 572 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 FAM160B2Q86V87 743 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 TM6SF1Q9BZW5 370 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
CCDC12-204ENST00000460035 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
CCDC12-204ENST00000460035 PRDM10Q9NQV6 1147 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 NAP1L2Q9ULW6 460 aaPredicted RBP12.69□□□□□ -0.38
CCDC12-204ENST00000460035 ADAMTS5Q9UNA0 930 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 CYP46A1Q9Y6A2 500 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 MCM3APO60318 1980 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 VWA5AO00534 786 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 CNMDO75829 334 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 RPS6KB1P23443 525 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 PSMC4P43686 418 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 ERVK-24P63145 666 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 CCNA1P78396 465 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 LACTBP83111 547 aaPredicted RBP12.68□□□□□ -0.38
CCDC12-204ENST00000460035 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
CCDC12-204ENST00000460035 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 RUFY3Q7L099 469 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 ARHGAP39Q9C0H5 1083 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 BTBD7Q9P203 1132 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
CCDC12-204ENST00000460035 LCTP09848 1927 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
CCDC12-204ENST00000460035 FDX1P10109 184 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 FCGRTP55899 365 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 SNAP25P60880 206 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 ASPRV1Q53RT3 343 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 SYDE2Q5VT97 1194 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 SGMS1Q86VZ5 419 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 RAB11FIP4Q86YS3 637 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 FBXL16Q8N461 479 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 MYL10Q9BUA6 226 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 UPF3BQ9BZI7 483 aaKnown RBP12.67□□□□□ -0.38
CCDC12-204ENST00000460035 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 VAT1LQ9HCJ6 419 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 PDRG1Q9NUG6 133 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
CCDC12-204ENST00000460035 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 TNPO2O14787 897 aaKnown RBP12.66□□□□□ -0.38
CCDC12-204ENST00000460035 DDAH1O94760 285 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 HOXD10P28358 340 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 STAT3P40763 770 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 TROAPQ12815 778 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 GRM4Q14833 912 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 STAG2Q8N3U4 1231 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
CCDC12-204ENST00000460035 BRF1Q92994 677 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 SPATC1LQ9H0A9 340 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
CCDC12-204ENST00000460035 RAVER2Q9HCJ3 691 aaKnown RBP12.66□□□□□ -0.38
CCDC12-204ENST00000460035 CALM1P0DP23 149 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 CALM2P0DP24 149 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 CALM3P0DP25 149 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 RXRAP19793 462 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 CTGFP29279 349 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 APOBRQ0VD83 1088 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
CCDC12-204ENST00000460035 NCAPG2Q86XI2 1143 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 COA7Q96BR5 231 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
CCDC12-204ENST00000460035 PORCNQ9H237 461 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 SLC38A10Q9HBR0 1119 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 BRPF3Q9ULD4 1205 aa12.65□□□□□ -0.38
CCDC12-204ENST00000460035 KIAA0100Q14667 2235 aaKnown RBP12.64□□□□□ -0.39
CCDC12-204ENST00000460035 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
CCDC12-204ENST00000460035 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 ZBTB43O43298 467 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 SLC25A27O95847 323 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 GNRH1P01148 92 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 ERCC3P19447 782 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 MAPK4P31152 587 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 KIF5BP33176 963 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 RCAN1P53805 252 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 OAZ1P54368 228 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 CAP1Q01518 475 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms