RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 FGAP02671 866 aa18.4■□□□□ 0.54
SDF4-204ENST00000459994 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
SDF4-204ENST00000459994 ZNF444Q8N0Y2 327 aaPredicted RBP18.4■□□□□ 0.54
SDF4-204ENST00000459994 MTMR4Q9NYA4 1195 aa18.4■□□□□ 0.54
SDF4-204ENST00000459994 ZNF214Q9UL59 606 aaPredicted RBP18.4■□□□□ 0.54
SDF4-204ENST00000459994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
SDF4-204ENST00000459994 LCTP09848 1927 aa18.4■□□□□ 0.54
SDF4-204ENST00000459994 NMT2O60551 498 aa18.39■□□□□ 0.53
SDF4-204ENST00000459994 TFAP4Q01664 338 aa18.39■□□□□ 0.53
SDF4-204ENST00000459994 PRAMEF19Q5SWL8 479 aa18.39■□□□□ 0.53
SDF4-204ENST00000459994 NECAB2Q7Z6G3 386 aa18.39■□□□□ 0.53
SDF4-204ENST00000459994 ANKLE1Q8NAG6 615 aa18.39■□□□□ 0.53
SDF4-204ENST00000459994 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
SDF4-204ENST00000459994 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
SDF4-204ENST00000459994 PGK2P07205 417 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 CYBAP13498 195 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 MFSD14CQ5VZR4 134 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 DPP9Q86TI2 863 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 MKL1Q969V6 931 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
SDF4-204ENST00000459994 RBM27Q9P2N5 1060 aaKnown RBP18.38■□□□□ 0.53
SDF4-204ENST00000459994 RIPK3Q9Y572 518 aa18.38■□□□□ 0.53
SDF4-204ENST00000459994 TRIOBPQ9H2D6 2365 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 STRNO43815 780 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 EVI5O60447 810 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 TSPY3P0CV98 308 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 TSPY8P0CW00 308 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 HSPA4P34932 840 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 RIOX2Q8IUF8 465 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 KCNB2Q92953 911 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 SLF1Q9BQI6 1058 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 PRO3102Q9H379 93 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 MROH8Q9H579 483 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 C11orf49Q9H6J7 331 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
SDF4-204ENST00000459994 TTLL1O95922 423 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 COL6A1P12109 1028 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 MCCP23508 829 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 CNGA1P29973 690 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 STAT3P40763 770 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 FXR1P51114 621 aaKnown RBP eCLIP18.36■□□□□ 0.53
SDF4-204ENST00000459994 PDE4BQ07343 736 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 OLFML2BQ68BL8 750 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 C7orf61Q8IZ16 206 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
SDF4-204ENST00000459994 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
SDF4-204ENST00000459994 IMMTQ16891 758 aaKnown RBP18.35■□□□□ 0.53
SDF4-204ENST00000459994 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
SDF4-204ENST00000459994 KIFC2Q96AC6 838 aa18.35■□□□□ 0.53
SDF4-204ENST00000459994 MMP19Q99542 508 aa18.35■□□□□ 0.53
SDF4-204ENST00000459994 ANAPC4Q9UJX5 808 aa18.35■□□□□ 0.53
SDF4-204ENST00000459994 RANBP2P49792 3224 aaKnown RBP18.35■□□□□ 0.53
SDF4-204ENST00000459994 ZNF213O14771 459 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 SLC27A2O14975 620 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 SLC25A27O95847 323 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 FCER1AP12319 257 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 CAPN2P17655 700 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 SLC4A3P48751 1232 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 TSGA10IPQ3SY00 556 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 CREB3L3Q68CJ9 461 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 SNRNP48Q6IEG0 339 aaKnown RBP18.34■□□□□ 0.53
SDF4-204ENST00000459994 ABRAQ8N0Z2 381 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 CPXCR1Q8N123 301 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 RAVER2Q9HCJ3 691 aaKnown RBP18.34■□□□□ 0.53
SDF4-204ENST00000459994 ZMYND8Q9ULU4 1186 aaPredicted RBP18.34■□□□□ 0.53
SDF4-204ENST00000459994 LTBP2Q14767 1821 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 LRRC37A2A6NM11 1700 aa18.34■□□□□ 0.53
SDF4-204ENST00000459994 CYP21A2P08686 494 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 TAL1P17542 331 aaPredicted RBP18.33■□□□□ 0.52
SDF4-204ENST00000459994 SYN1P17600 705 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
SDF4-204ENST00000459994 HAND2P61296 217 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 LRRC26Q2I0M4 334 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 ZNF792Q3KQV3 632 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
SDF4-204ENST00000459994 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
SDF4-204ENST00000459994 FGRP09769 529 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 ANAPC15P60006 121 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 SNAP25P60880 206 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 GJC2Q5T442 439 aaPredicted RBP18.32■□□□□ 0.52
SDF4-204ENST00000459994 PRPF38AQ8NAV1 312 aaKnown RBP18.32■□□□□ 0.52
SDF4-204ENST00000459994 IL17RAQ96F46 866 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 SZT2Q5T011 3432 aa18.32■□□□□ 0.52
SDF4-204ENST00000459994 TMEM232C9JQI7 657 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 RANBP6O60518 1105 aaKnown RBP18.31■□□□□ 0.52
SDF4-204ENST00000459994 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
SDF4-204ENST00000459994 BMP3P12645 472 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 KCTD1Q719H9 257 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 TBC1D10CQ8IV04 446 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 LENG1Q96BZ8 264 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms