RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CYP21A2P08686 494 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 ZKSCAN1P17029 563 aaPredicted RBP24.41■■□□□ 1.5
VARS-218ENST00000459667 CCDC178Q5BJE1 867 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 KCTD1Q719H9 257 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 FAM160B2Q86V87 743 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 RIOX2Q8IUF8 465 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 TRMT44Q8IYL2 757 aaKnown RBP24.41■■□□□ 1.5
VARS-218ENST00000459667 CHURC1Q8WUH1 139 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 DCAF4Q8WV16 495 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 MAP4K1Q92918 833 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 RNF208Q9H0X6 261 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 UNC93B1Q9H1C4 597 aa24.41■■□□□ 1.5
VARS-218ENST00000459667 STRNO43815 780 aa24.4■■□□□ 1.5
VARS-218ENST00000459667 CCDC96Q2M329 555 aa24.4■■□□□ 1.5
VARS-218ENST00000459667 TEX13BQ9BXU2 312 aa24.4■■□□□ 1.5
VARS-218ENST00000459667 ZSWIM5Q9P217 1185 aa24.4■■□□□ 1.5
VARS-218ENST00000459667 EN2P19622 333 aaPredicted RBP24.39■■□□□ 1.49
VARS-218ENST00000459667 ADORA2AP29274 412 aa24.39■■□□□ 1.49
VARS-218ENST00000459667 COPB2P35606 906 aa24.39■■□□□ 1.49
VARS-218ENST00000459667 CCL14Q16627 93 aa24.39■■□□□ 1.49
VARS-218ENST00000459667 SNRNP48Q6IEG0 339 aaKnown RBP24.39■■□□□ 1.49
VARS-218ENST00000459667 DGKHQ86XP1 1220 aa24.39■■□□□ 1.49
VARS-218ENST00000459667 ZSCAN10Q96SZ4 725 aaPredicted RBP24.39■■□□□ 1.49
VARS-218ENST00000459667 SLC38A10Q9HBR0 1119 aa24.39■■□□□ 1.49
VARS-218ENST00000459667 RBM8AQ9Y5S9 174 aaKnown RBP24.39■■□□□ 1.49
VARS-218ENST00000459667 PLA2G6O60733 806 aa24.38■■□□□ 1.49
VARS-218ENST00000459667 TRIM32Q13049 653 aa24.38■■□□□ 1.49
VARS-218ENST00000459667 TRDNQ13061 729 aa24.38■■□□□ 1.49
VARS-218ENST00000459667 CPXCR1Q8N123 301 aa24.38■■□□□ 1.49
VARS-218ENST00000459667 LSG1Q9H089 658 aaKnown RBP24.38■■□□□ 1.49
VARS-218ENST00000459667 ATP2A1O14983 1001 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 CDC45O75419 566 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 GJB1P08034 283 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 HOXC6P09630 235 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 FDX1P10109 184 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 FCER1AP12319 257 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 CASC1Q6TDU7 716 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 DPP9Q86TI2 863 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 ABRAQ8N0Z2 381 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 UBAC1Q9BSL1 405 aa24.37■■□□□ 1.49
VARS-218ENST00000459667 RAVER2Q9HCJ3 691 aaKnown RBP24.37■■□□□ 1.49
VARS-218ENST00000459667 TNKSO95271 1327 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 PDHBP11177 359 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 OAZ1P54368 228 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 ENAHQ8N8S7 591 aaPredicted RBP24.36■■□□□ 1.49
VARS-218ENST00000459667 NPLOC4Q8TAT6 608 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 MMP19Q99542 508 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 KAT14Q9H8E8 782 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 ANO2Q9NQ90 1003 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 TAF6LQ9Y6J9 622 aa24.36■■□□□ 1.49
VARS-218ENST00000459667 FRMPD2Q68DX3 1309 aaPredicted RBP24.35■■□□□ 1.49
VARS-218ENST00000459667 E7EWF7 191 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 PRKAR2AP13861 404 aaKnown RBP24.35■■□□□ 1.49
VARS-218ENST00000459667 SLC4A3P48751 1232 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 KCTD2Q14681 263 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 RALYLQ86SE5 291 aaKnown RBP24.35■■□□□ 1.49
VARS-218ENST00000459667 ANKS1AQ92625 1134 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.35■■□□□ 1.498e-6■□□□□ 10.8
VARS-218ENST00000459667 PAK6Q9NQU5 681 aaPredicted RBP24.35■■□□□ 1.49
VARS-218ENST00000459667 SLC5A4Q9NY91 659 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 FLRT1Q9NZU1 646 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 PRR12Q9ULL5 1215 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 RIPK3Q9Y572 518 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 RPTORQ8N122 1335 aa24.35■■□□□ 1.49
VARS-218ENST00000459667 COBLO75128 1261 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 GJA8P48165 433 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 MAP3K21Q5TCX8 1036 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 TTBK2Q6IQ55 1244 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 CYB5R4Q7L1T6 521 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 PNMA1Q8ND90 353 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 NCOA7Q8NI08 942 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 U2AF1L4Q8WU68 220 aaKnown RBP24.34■■□□□ 1.49
VARS-218ENST00000459667 SHISA4Q96DD7 197 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 HMX1Q9NP08 348 aaPredicted RBP24.34■■□□□ 1.49
VARS-218ENST00000459667 GPCPD1Q9NPB8 672 aa24.34■■□□□ 1.49
VARS-218ENST00000459667 ZNFX1Q9P2E3 1918 aaKnown RBP24.33■■□□□ 1.49
VARS-218ENST00000459667 SNHG28P0DPA3 235 aa24.33■■□□□ 1.49
VARS-218ENST00000459667 ZNF543Q08ER8 600 aa24.33■■□□□ 1.49
VARS-218ENST00000459667 MFSD14CQ5VZR4 134 aa24.33■■□□□ 1.49
VARS-218ENST00000459667 STOX1Q6ZVD7 989 aa24.33■■□□□ 1.49
VARS-218ENST00000459667 DEFB118Q96PH6 123 aa24.33■■□□□ 1.49
VARS-218ENST00000459667 SLC16A2P36021 539 aa24.32■■□□□ 1.48
VARS-218ENST00000459667 CACNB2Q08289 660 aaPredicted RBP24.32■■□□□ 1.48
VARS-218ENST00000459667 IFIT1BQ5T764 474 aaKnown RBP24.32■■□□□ 1.48
VARS-218ENST00000459667 SYDE2Q5VT97 1194 aa24.32■■□□□ 1.48
VARS-218ENST00000459667 BTNL9Q6UXG8 535 aa24.32■■□□□ 1.48
VARS-218ENST00000459667 BRCA2P51587 3418 aa24.32■■□□□ 1.48
VARS-218ENST00000459667 SGPL1O95470 568 aa24.31■■□□□ 1.48
VARS-218ENST00000459667 SNAP25P60880 206 aa24.31■■□□□ 1.48
VARS-218ENST00000459667 GPATCH4Q5T3I0 446 aaKnown RBP24.31■■□□□ 1.48
VARS-218ENST00000459667 OLFML2BQ68BL8 750 aa24.31■■□□□ 1.48
VARS-218ENST00000459667 CCDC174Q6PII3 467 aa24.31■■□□□ 1.48
VARS-218ENST00000459667 FBXO40Q9UH90 709 aa24.31■■□□□ 1.48
VARS-218ENST00000459667 ZNF536O15090 1300 aa24.31■■□□□ 1.48
VARS-218ENST00000459667 SLC27A2O14975 620 aa24.3■■□□□ 1.48
VARS-218ENST00000459667 PGK2P07205 417 aa24.3■■□□□ 1.48
VARS-218ENST00000459667 SEC23AQ15436 765 aa24.3■■□□□ 1.48
VARS-218ENST00000459667 CHST13Q8NET6 341 aa24.3■■□□□ 1.48
VARS-218ENST00000459667 AGBL1Q96MI9 1066 aa24.3■■□□□ 1.48
VARS-218ENST00000459667 HOMER2Q9NSB8 354 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms