RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 DPEP1P16444 411 aa18.27■□□□□ 0.52
LSS-205ENST00000457828 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
LSS-205ENST00000457828 BCL9O00512 1426 aa18.27■□□□□ 0.52
LSS-205ENST00000457828 CKAP4Q07065 602 aaKnown RBP18.27■□□□□ 0.51
LSS-205ENST00000457828 RABL6Q3YEC7 729 aaPredicted RBP18.27■□□□□ 0.51
LSS-205ENST00000457828 TOGARAM2Q6ZUX3 1019 aa18.27■□□□□ 0.51
LSS-205ENST00000457828 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.51
LSS-205ENST00000457828 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.27■□□□□ 0.51
LSS-205ENST00000457828 MAN1B1Q9UKM7 699 aa18.27■□□□□ 0.51
LSS-205ENST00000457828 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.51
LSS-205ENST00000457828 CASP14P31944 242 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
LSS-205ENST00000457828 EXOSC10Q01780 885 aaKnown RBP18.26■□□□□ 0.51
LSS-205ENST00000457828 BRD3Q15059 726 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 ENGASEQ8NFI3 743 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 RIPOR2Q9Y4F9 1068 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 KIF5AQ12840 1032 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 MICALL1Q8N3F8 863 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 EHBP1Q8NDI1 1231 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 INCENPQ9NQS7 918 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 FOXN1O15353 648 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 SLFN14P0C7P3 912 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 CYP26C1Q6V0L0 522 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 HOMER2Q9NSB8 354 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 TMTC1Q8IUR5 882 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 LRRC47Q8N1G4 583 aaKnown RBP18.26■□□□□ 0.51
LSS-205ENST00000457828 SLC35F6Q8N357 371 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
LSS-205ENST00000457828 FAM84BQ96KN1 310 aaPredicted RBP18.26■□□□□ 0.51
LSS-205ENST00000457828 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 CCDC42Q96M95 316 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 SP4Q02446 784 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 ICA1Q05084 483 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 MIGA2Q7L4E1 593 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 PSMB7Q99436 277 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 PLA2G12BQ9BX93 195 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 CSRNP2Q9H175 543 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 SERPINB13Q9UIV8 391 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 KRT83P78385 493 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 TBC1D16Q8TBP0 767 aa18.25■□□□□ 0.51
LSS-205ENST00000457828 FDPSP14324 419 aaKnown RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 MRPL12P52815 198 aaKnown RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 RBL2Q08999 1139 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 HLTFQ14527 1009 aaKnown RBP eCLIP18.24■□□□□ 0.51
LSS-205ENST00000457828 RNF187Q5TA31 235 aaPredicted RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 SRGAP1Q7Z6B7 1085 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 WDR24Q96S15 920 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 MMRN2Q9H8L6 949 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 TCHHQ07283 1943 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 CDR1P51861 262 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 ASIC1P78348 528 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 PAK1Q13153 545 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 ZNF654Q8IZM8 581 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 ALS2CR12Q96Q35 445 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 IRX2Q9BZI1 471 aaPredicted RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 IVNS1ABPQ9Y6Y0 642 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 CYP2D7A0A087X1C5 515 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 ERCC3P19447 782 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 TTC38Q5R3I4 469 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 KIFC2Q96AC6 838 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 PYM1Q9BRP8 204 aaKnown RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
LSS-205ENST00000457828 EXOC1Q9NV70 894 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
LSS-205ENST00000457828 CDC23Q9UJX2 597 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 TNKSO95271 1327 aa18.24■□□□□ 0.51
LSS-205ENST00000457828 PLCD1P51178 756 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 ABCB5Q2M3G0 1257 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 USH1GQ495M9 461 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 TAF4BQ92750 862 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 VTI1AQ96AJ9 217 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 KIF1AQ12756 1690 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 PLSCR1O15162 318 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 CASP1P29466 404 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 GTF2A1P52655 376 aaPredicted RBP18.23■□□□□ 0.51
LSS-205ENST00000457828 SUPT20HL1Q3ZLR7 823 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 PPP4R3AQ6IN85 833 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 SHC4Q6S5L8 630 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 ACRBPQ8NEB7 543 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 B4DLN1 442 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 CSF1RP07333 972 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 CC2D1AQ6P1N0 951 aaPredicted RBP18.23■□□□□ 0.51
LSS-205ENST00000457828 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 GPATCH11Q8N954 259 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 AFAP1L1Q8TED9 768 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 PCDHB6Q9Y5E3 794 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 TUBB4BP68371 445 aa18.23■□□□□ 0.51
LSS-205ENST00000457828 TTC31Q49AM3 519 aaPredicted RBP18.23■□□□□ 0.51
LSS-205ENST00000457828 ENC1O14682 589 aa18.22■□□□□ 0.51
LSS-205ENST00000457828 SPATA1Q5VX52 437 aa18.22■□□□□ 0.51
LSS-205ENST00000457828 PNMA1Q8ND90 353 aa18.22■□□□□ 0.51
LSS-205ENST00000457828 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
LSS-205ENST00000457828 PLEKHG2Q9H7P9 1386 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms