RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.08□□□□□ -0.8
LINC01888-202ENST00000457602 AFG3L2Q9Y4W6 797 aa10.08□□□□□ -0.8
LINC01888-202ENST00000457602 CENPFP49454 3210 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 MAP4K4O95819 1239 aaPredicted RBP10.07□□□□□ -0.8
LINC01888-202ENST00000457602 BCRP11274 1271 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
LINC01888-202ENST00000457602 MCAMP43121 646 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 ERVK-9P63128 1117 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 UBXN2AP68543 259 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 RELBQ01201 579 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 PRKCZQ05513 592 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 CCDC158Q5M9N0 1113 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 RNF20Q5VTR2 975 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
LINC01888-202ENST00000457602 TEX11Q8IYF3 940 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 ZNF384Q8TF68 577 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
LINC01888-202ENST00000457602 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
LINC01888-202ENST00000457602 TTLL8A6PVC2 850 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 H3BM21 787 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 TNPO2O14787 897 aaKnown RBP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 MAN1A2O60476 641 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 BAG3O95817 575 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 HNRNPUQ00839 825 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 SPP2Q13103 211 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 TNNI3KQ59H18 835 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 ANKRD13CQ8N6S4 541 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 SH3RF3Q8TEJ3 882 aaPredicted RBP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 DBNDD2Q9BQY9 259 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 RNF208Q9H0X6 261 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 C1orf115Q9H7X2 142 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 AATFQ9NY61 560 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC01888-202ENST00000457602 GABRQQ9UN88 632 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 AGTPBP1Q9UPW5 1226 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 SLC45A1Q9Y2W3 748 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 FPGT-TNNI3KV9GXZ4 949 aa10.06□□□□□ -0.8
LINC01888-202ENST00000457602 KIAA0100Q14667 2235 aaKnown RBP10.05□□□□□ -0.8
LINC01888-202ENST00000457602 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 CCL5P13501 91 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 ABL2P42684 1182 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 CTSOP43234 321 aaPredicted RBP10.05□□□□□ -0.8
LINC01888-202ENST00000457602 ATP8B2P98198 1209 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 ITPRIPQ8IWB1 547 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 DPF3Q92784 378 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 BRCA2P51587 3418 aa10.05□□□□□ -0.8
LINC01888-202ENST00000457602 MKI67P46013 3256 aaKnown RBP10.04□□□□□ -0.8
LINC01888-202ENST00000457602 USP17L5A8MUK1 530 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 ADCY3O60266 1144 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 CAP2P40123 477 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 PTGIRP43119 386 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 SCTRP47872 440 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 GJA8P48165 433 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 FLT3LGP49771 235 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 PABPC4Q13310 644 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01888-202ENST00000457602 TREML2Q5T2D2 321 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 SSH3Q8TE77 659 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 TGFBRAP1Q8WUH2 860 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 INSM2Q96T92 566 aaPredicted RBP10.04□□□□□ -0.8
LINC01888-202ENST00000457602 AS3MTQ9HBK9 375 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 GPR108Q9NPR9 543 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
LINC01888-202ENST00000457602 HERC5Q9UII4 1024 aaKnown RBP10.04□□□□□ -0.8
LINC01888-202ENST00000457602 H0YGN5 161 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 CYP2E1P05181 493 aaPredicted RBP10.03□□□□□ -0.8
LINC01888-202ENST00000457602 GJB1P08034 283 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 ELNP15502 786 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 ZAP70P43403 619 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 HMGCS2P54868 508 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 PHTF2Q8N3S3 785 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 CRACR2BQ8N4Y2 399 aaPredicted RBP10.03□□□□□ -0.8
LINC01888-202ENST00000457602 COA7Q96BR5 231 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 POM121Q96HA1 1249 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
LINC01888-202ENST00000457602 ZNF395Q9H8N7 513 aaPredicted RBP10.03□□□□□ -0.8
LINC01888-202ENST00000457602 PCDHB11Q9Y5F2 797 aa10.03□□□□□ -0.8
LINC01888-202ENST00000457602 COL2A1P02458 1487 aaPredicted RBP10.03□□□□□ -0.8
LINC01888-202ENST00000457602 WIPF1O43516 503 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 INHAP05111 366 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 RRP1BQ14684 758 aaKnown RBP10.02□□□□□ -0.81
LINC01888-202ENST00000457602 FAM110CQ1W6H9 321 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81
LINC01888-202ENST00000457602 FOXD4L5Q5VV16 416 aaPredicted RBP10.02□□□□□ -0.81
LINC01888-202ENST00000457602 RNF217Q8TC41 542 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 U2AF1L4Q8WU68 220 aaKnown RBP10.02□□□□□ -0.81
LINC01888-202ENST00000457602 HTATIP2Q9BUP3 242 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
LINC01888-202ENST00000457602 TMOD4Q9NZQ9 345 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
LINC01888-202ENST00000457602 FLT1P17948 1338 aa10.02□□□□□ -0.81
LINC01888-202ENST00000457602 PHIPQ8WWQ0 1821 aa10.01□□□□□ -0.81
LINC01888-202ENST00000457602 ZBTB7BO15156 539 aaPredicted RBP10.01□□□□□ -0.81
LINC01888-202ENST00000457602 TRAK2O60296 914 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms