RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 GRM4Q14833 912 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 GPCPD1Q9NPB8 672 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 ZNF214Q9UL59 606 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-215ENST00000457039 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 PARP1P09874 1014 aaKnown RBP16.51■□□□□ 0.23
SMPD4-215ENST00000457039 FDX1P10109 184 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 SLC16A2P36021 539 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-215ENST00000457039 Q6ZUG5 572 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 TRIM47Q96LD4 638 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
SMPD4-215ENST00000457039 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
SMPD4-215ENST00000457039 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
SMPD4-215ENST00000457039 COL11A1P12107 1806 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-215ENST00000457039 CCDC69A6NI79 296 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 PSMC4P43686 418 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
SMPD4-215ENST00000457039 KIF22Q14807 665 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 SYDE2Q5VT97 1194 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 MOV10L1Q9BXT6 1211 aaKnown RBP16.5■□□□□ 0.23
SMPD4-215ENST00000457039 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 PORCNQ9H237 461 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
SMPD4-215ENST00000457039 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
SMPD4-215ENST00000457039 ZNF536O15090 1300 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 MGAMO43451 1857 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 ZBED4O75132 1171 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 OAZ1P54368 228 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 FCGRTP55899 365 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 EVCP57679 992 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 CCNA1P78396 465 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-215ENST00000457039 TOB2Q14106 344 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-215ENST00000457039 SLC35G1Q2M3R5 365 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 APOA5Q6Q788 366 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 CTU1Q7Z7A3 348 aaKnown RBP16.49■□□□□ 0.23
SMPD4-215ENST00000457039 SHCBP1Q8NEM2 672 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 BRF1Q92994 677 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 KIF2CQ99661 725 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 EFCC1Q9HA90 598 aa16.49■□□□□ 0.23
SMPD4-215ENST00000457039 GNRH1P01148 92 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 CALM1P0DP23 149 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 CALM2P0DP24 149 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 CALM3P0DP25 149 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 MAPK4P31152 587 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 STAT3P40763 770 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 RIOX2Q8IUF8 465 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
SMPD4-215ENST00000457039 HTTP42858 3142 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 TNPO2O14787 897 aaKnown RBP16.47■□□□□ 0.23
SMPD4-215ENST00000457039 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-215ENST00000457039 FMNL1O95466 1100 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-215ENST00000457039 ERCC3P19447 782 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 RXRAP19793 462 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 RCAN1P53805 252 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 SNAP25P60880 206 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 ARHGEF6Q15052 776 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 MTMR8Q96EF0 704 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 ALDH8A1Q9H2A2 487 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-215ENST00000457039 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
SMPD4-215ENST00000457039 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
SMPD4-215ENST00000457039 CYTH3O43739 400 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 SLC25A27O95847 323 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 KIF5BP33176 963 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 FGD1P98174 961 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 APOBRQ0VD83 1088 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 PLS1Q14651 629 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
SMPD4-215ENST00000457039 GPR142Q7Z601 462 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 CTCFLQ8NI51 663 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-215ENST00000457039 MROH8Q9H579 483 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 RIOX1Q9H6W3 641 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 JMJD4Q9H9V9 463 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 PDRG1Q9NUG6 133 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms