RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 DCAF4Q8WV16 495 aa21.27■■□□□ 1
PDLIM2-215ENST00000456545 GJB1P08034 283 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 FDX1P10109 184 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 GRB14Q14449 540 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 SNRNP48Q6IEG0 339 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 TRIB2Q92519 343 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 USP6NLQ92738 828 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 MMP19Q99542 508 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 TEX13BQ9BXU2 312 aa21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 HMX1Q9NP08 348 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-215ENST00000456545 ADORA2AP29274 412 aa21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 KCTD2Q14681 263 aa21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 UBAC1Q9BSL1 405 aa21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 ZSWIM5Q9P217 1185 aa21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 COL11A1P12107 1806 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 PARP14Q460N5 1801 aa21.25■□□□□ 0.99
PDLIM2-215ENST00000456545 TFRCP02786 760 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 NOVP48745 357 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 CCL14Q16627 93 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 RALYLQ86SE5 291 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 DGKHQ86XP1 1220 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 ZSCAN10Q96SZ4 725 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 ESYT1Q9BSJ8 1104 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 KAT14Q9H8E8 782 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 RAVER2Q9HCJ3 691 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 GPCPD1Q9NPB8 672 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 ZNF214Q9UL59 606 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 PLXNB2O15031 1838 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 RPTORQ8N122 1335 aa21.24■□□□□ 0.99
PDLIM2-215ENST00000456545 TRIM32Q13049 653 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 ABRAQ8N0Z2 381 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 REPS2Q8NFH8 660 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 MAP4K1Q92918 833 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 DEFB118Q96PH6 123 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 SLC38A10Q9HBR0 1119 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 A0A0G2JMZ2 1700 aa21.23■□□□□ 0.99
PDLIM2-215ENST00000456545 PLA2G6O60733 806 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 SGPL1O95470 568 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 CYP21A2P08686 494 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 PRKAR2AP13861 404 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 GJA8P48165 433 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 NPLOC4Q8TAT6 608 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 U2AF1L4Q8WU68 220 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 DDX11Q96FC9 970 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 ANO2Q9NQ90 1003 aa21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 RBM8AQ9Y5S9 174 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 FRMPD2Q68DX3 1309 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-215ENST00000456545 ERICH2A1L162 156 aa21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 ATP2A1O14983 1001 aa21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 CDC45O75419 566 aa21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 HOXC6P09630 235 aa21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 OAZ1P54368 228 aa21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 NCOA7Q8NI08 942 aa21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 KIAA0100Q14667 2235 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-215ENST00000456545 RBBP6Q7Z6E9 1792 aaKnown RBP21.2■□□□□ 0.99
PDLIM2-215ENST00000456545 COBLO75128 1261 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 SLC16A2P36021 539 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 CACNB2Q08289 660 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 IFIT1BQ5T764 474 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 CCDC174Q6PII3 467 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 PNMA1Q8ND90 353 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 FBXO40Q9UH90 709 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 PRR12Q9ULL5 1215 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 RIPK3Q9Y572 518 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 TNKSO95271 1327 aa21.2■□□□□ 0.98
PDLIM2-215ENST00000456545 HTTP42858 3142 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 E7EWF7 191 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 PDHBP11177 359 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 CAPN2P17655 700 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 CNGA1P29973 690 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 SNAP25P60880 206 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 SYDE2Q5VT97 1194 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 TTBK2Q6IQ55 1244 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 RASGRP2Q7LDG7 609 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 ANKRD35Q8N283 1001 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 PAK6Q9NQU5 681 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 HOMER2Q9NSB8 354 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 FLRT1Q9NZU1 646 aa21.19■□□□□ 0.98
PDLIM2-215ENST00000456545 ZNFX1Q9P2E3 1918 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 PGK2P07205 417 aa21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 CYP2C19P33261 490 aa21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 SART3Q15020 963 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 GPATCH4Q5T3I0 446 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 ENAHQ8N8S7 591 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 CHST13Q8NET6 341 aa21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 ANKS1AQ92625 1134 aa21.18■□□□□ 0.98
PDLIM2-215ENST00000456545 IFIT3O14879 490 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 ALAS1P13196 640 aa21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 ZNF543Q08ER8 600 aa21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 MAP3K21Q5TCX8 1036 aa21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 OLFML2BQ68BL8 750 aa21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 CYB5R4Q7L1T6 521 aa21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 AGBL1Q96MI9 1066 aa21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 LSG1Q9H089 658 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-215ENST00000456545 CCND3P30281 292 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms