RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 PRPF38AQ8NAV1 312 aaKnown RBP25.88■■□□□ 1.73
SEC22C-213ENST00000456222 KIFC2Q96AC6 838 aa25.88■■□□□ 1.73
SEC22C-213ENST00000456222 CHMP4CQ96CF2 233 aa25.88■■□□□ 1.73
SEC22C-213ENST00000456222 TEX13BQ9BXU2 312 aa25.88■■□□□ 1.73
SEC22C-213ENST00000456222 PDE4BQ07343 736 aa25.87■■□□□ 1.73
SEC22C-213ENST00000456222 CPXCR1Q8N123 301 aa25.87■■□□□ 1.73
SEC22C-213ENST00000456222 GMCL1P1Q8NEA9 526 aa25.87■■□□□ 1.73
SEC22C-213ENST00000456222 EVI5LQ96CN4 794 aa25.87■■□□□ 1.73
SEC22C-213ENST00000456222 FAM227BQ96M60 508 aa25.87■■□□□ 1.73
SEC22C-213ENST00000456222 TINF2Q9BSI4 451 aa25.87■■□□□ 1.73
SEC22C-213ENST00000456222 RAVER2Q9HCJ3 691 aaKnown RBP25.87■■□□□ 1.73
SEC22C-213ENST00000456222 NMT2O60551 498 aa25.86■■□□□ 1.73
SEC22C-213ENST00000456222 MYCNP04198 464 aaPredicted RBP25.86■■□□□ 1.73
SEC22C-213ENST00000456222 SLC4A3P48751 1232 aa25.86■■□□□ 1.73
SEC22C-213ENST00000456222 SLFN13Q68D06 897 aa25.86■■□□□ 1.73
SEC22C-213ENST00000456222 RASGRP2Q7LDG7 609 aa25.86■■□□□ 1.73
SEC22C-213ENST00000456222 LNPKQ9C0E8 428 aa25.86■■□□□ 1.73
SEC22C-213ENST00000456222 SLC38A10Q9HBR0 1119 aa25.86■■□□□ 1.73
SEC22C-213ENST00000456222 ZBTB47Q9UFB7 747 aaPredicted RBP25.86■■□□□ 1.73
SEC22C-213ENST00000456222 A0A0D9SFI3 127 aa25.85■■□□□ 1.73
SEC22C-213ENST00000456222 MDM2Q00987 491 aaPredicted RBP25.85■■□□□ 1.73
SEC22C-213ENST00000456222 ARRDC4Q8NCT1 418 aa25.85■■□□□ 1.73
SEC22C-213ENST00000456222 LENG1Q96BZ8 264 aaPredicted RBP25.85■■□□□ 1.73
SEC22C-213ENST00000456222 IL17RBQ9NRM6 502 aa25.85■■□□□ 1.73
SEC22C-213ENST00000456222 DIS3Q9Y2L1 958 aaKnown RBP25.85■■□□□ 1.73
SEC22C-213ENST00000456222 DNAJC25-GNG10A0A024R161 153 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 ATP2A1O14983 1001 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 ZNF865P0CJ78 1059 aaPredicted RBP25.84■■□□□ 1.73
SEC22C-213ENST00000456222 COPB2P35606 906 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 RTP1P59025 263 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 LRRC41Q15345 812 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 FEM1BQ9UK73 627 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 SYNPO2Q9UMS6 1093 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 LTBP2Q14767 1821 aa25.84■■□□□ 1.73
SEC22C-213ENST00000456222 ZBED4O75132 1171 aa25.83■■□□□ 1.73
SEC22C-213ENST00000456222 SLC3A2P08195 630 aaKnown RBP25.83■■□□□ 1.73
SEC22C-213ENST00000456222 BMP3P12645 472 aa25.83■■□□□ 1.73
SEC22C-213ENST00000456222 FGD4Q96M96 766 aa25.83■■□□□ 1.73
SEC22C-213ENST00000456222 UBE2OQ9C0C9 1292 aaKnown RBP25.83■■□□□ 1.73
SEC22C-213ENST00000456222 KBTBD13C9JR72 458 aa25.82■■□□□ 1.72
SEC22C-213ENST00000456222 ADCYAP1R1P41586 468 aa25.82■■□□□ 1.72
SEC22C-213ENST00000456222 ZNF589Q86UQ0 364 aaPredicted RBP25.82■■□□□ 1.72
SEC22C-213ENST00000456222 FERMT2Q96AC1 680 aa25.82■■□□□ 1.72
SEC22C-213ENST00000456222 NRBP1Q9UHY1 535 aa25.82■■□□□ 1.72
SEC22C-213ENST00000456222 ANAPC4Q9UJX5 808 aa25.82■■□□□ 1.72
SEC22C-213ENST00000456222 TMEM232C9JQI7 657 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 SNAI1O95863 264 aaPredicted RBP25.81■■□□□ 1.72
SEC22C-213ENST00000456222 PGK1P00558 417 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 IGHDP01880 384 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 MCCP23508 829 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 B4GALNT3Q6L9W6 998 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 SLC39A5Q6ZMH5 540 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 SMC5Q8IY18 1101 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 TDHQ8IZJ6 230 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 HELLSQ9NRZ9 838 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 ATP11BQ9Y2G3 1177 aa25.81■■□□□ 1.72
SEC22C-213ENST00000456222 TSPY2A6NKD2 308 aa25.8■■□□□ 1.72
SEC22C-213ENST00000456222 NMIQ13287 307 aaPredicted RBP25.8■■□□□ 1.72
SEC22C-213ENST00000456222 ALX1Q15699 326 aa25.8■■□□□ 1.72
SEC22C-213ENST00000456222 DDX11Q96FC9 970 aa25.8■■□□□ 1.72
SEC22C-213ENST00000456222 GMCL1Q96IK5 515 aa25.8■■□□□ 1.72
SEC22C-213ENST00000456222 XPNPEP3Q9NQH7 507 aa25.8■■□□□ 1.72
SEC22C-213ENST00000456222 ISY1Q9ULR0 285 aaKnown RBP25.8■■□□□ 1.72
SEC22C-213ENST00000456222 STX8Q9UNK0 236 aa25.8■■□□□ 1.72
SEC22C-213ENST00000456222 FGAP02671 866 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 RARBP10826 455 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 SNX17Q15036 470 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 TRIM60Q495X7 471 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.79■■□□□ 1.72
SEC22C-213ENST00000456222 EXOC6Q8TAG9 804 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 HOMER2Q9NSB8 354 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 ZNF536O15090 1300 aa25.79■■□□□ 1.72
SEC22C-213ENST00000456222 RANBP6O60518 1105 aaKnown RBP25.78■■□□□ 1.72
SEC22C-213ENST00000456222 SNAP25P60880 206 aa25.78■■□□□ 1.72
SEC22C-213ENST00000456222 MCMDC2Q4G0Z9 681 aa25.78■■□□□ 1.72
SEC22C-213ENST00000456222 KCTD1Q719H9 257 aa25.78■■□□□ 1.72
SEC22C-213ENST00000456222 CTDP1Q9Y5B0 961 aaPredicted RBP25.78■■□□□ 1.72
SEC22C-213ENST00000456222 A0A0C4DFX4 3053 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 ORC4O43929 436 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 FGRP09769 529 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 SLC1A4P43007 532 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 NOVP48745 357 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 STAT2P52630 851 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 OAZ1P54368 228 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 MAMDC4Q6UXC1 1216 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 AGBL1Q96MI9 1066 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 PHF24Q9UPV7 400 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 MTMR7Q9Y216 660 aa25.77■■□□□ 1.72
SEC22C-213ENST00000456222 ADCY6O43306 1168 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 ADAMTS4O75173 837 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 HSPD1P10809 573 aaKnown RBP25.76■■□□□ 1.71
SEC22C-213ENST00000456222 AKR1A1P14550 325 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 IRX5P78411 483 aaPredicted RBP25.76■■□□□ 1.71
SEC22C-213ENST00000456222 LRIT3Q3SXY7 679 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 ANKRD35Q8N283 1001 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 STAG1Q8WVM7 1258 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 CNPY2Q9Y2B0 182 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 SYNGAP1Q96PV0 1343 aa25.76■■□□□ 1.71
SEC22C-213ENST00000456222 TRIM6-TRIM34B2RNG4 842 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 HAND2P61296 217 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms