RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 TDHQ8IZJ6 230 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
TREX1-203ENST00000456089 CPXCR1Q8N123 301 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 KIFC2Q96AC6 838 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 INCENPQ9NQS7 918 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 COL6A3P12111 3177 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 KBTBD13C9JR72 458 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 ADCYAP1R1P41586 468 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 KCTD2Q14681 263 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 LRRC41Q15345 812 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 ZNF792Q3KQV3 632 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 ARRDC4Q8NCT1 418 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 TINF2Q9BSI4 451 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 NACAP1Q9BZK3 213 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
TREX1-203ENST00000456089 FOXP2O15409 715 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 NUCB1Q02818 461 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 CTDSPL2Q05D32 466 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 SLC39A5Q6ZMH5 540 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 RASGRP2Q7LDG7 609 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 NAPBQ9H115 298 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 RAVER2Q9HCJ3 691 aaKnown RBP15.37■□□□□ 0.05
TREX1-203ENST00000456089 MTMR4Q9NYA4 1195 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
TREX1-203ENST00000456089 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
TREX1-203ENST00000456089 LAMA2P24043 3122 aaKnown RBP15.37■□□□□ 0.05
TREX1-203ENST00000456089 PGK1P00558 417 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 TSPY3P0CV98 308 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 TSPY8P0CW00 308 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 TFAP4Q01664 338 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 PPARAQ07869 468 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 TRIM60Q495X7 471 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 VPS53Q5VIR6 699 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 RILPL2Q969X0 211 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 TEX13BQ9BXU2 312 aa15.36■□□□□ 0.05
TREX1-203ENST00000456089 PRDM5Q9NQX1 630 aaPredicted RBP15.36■□□□□ 0.05
TREX1-203ENST00000456089 LCTP09848 1927 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 NMT2O60551 498 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 TTLL1O95922 423 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 ZNF865P0CJ78 1059 aaPredicted RBP15.35■□□□□ 0.05
TREX1-203ENST00000456089 SLFN13Q68D06 897 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 PRPF38AQ8NAV1 312 aaKnown RBP15.35■□□□□ 0.05
TREX1-203ENST00000456089 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 MKL1Q969V6 931 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 ZNF287Q9HBT7 754 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 XPNPEP3Q9NQH7 507 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 HOMER2Q9NSB8 354 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
TREX1-203ENST00000456089 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
TREX1-203ENST00000456089 ZBED4O75132 1171 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 SLC3A2P08195 630 aaKnown RBP15.34■□□□□ 0.05
TREX1-203ENST00000456089 RARBP10826 455 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 SNAP25P60880 206 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
TREX1-203ENST00000456089 PDE4BQ07343 736 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 LRIT3Q3SXY7 679 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 SH3RF1Q7Z6J0 888 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 DEFB123Q8N688 67 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 DDX11Q96FC9 970 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 LBHD1Q9BQE6 289 aaPredicted RBP15.34■□□□□ 0.05
TREX1-203ENST00000456089 MTMR7Q9Y216 660 aa15.34■□□□□ 0.05
TREX1-203ENST00000456089 TMEM232C9JQI7 657 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 SNAI1O95863 264 aaPredicted RBP15.33■□□□□ 0.04
TREX1-203ENST00000456089 BMP3P12645 472 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 COPB2P35606 906 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 SLC38A10Q9HBR0 1119 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 HELLSQ9NRZ9 838 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 PRKAG2Q9UGJ0 569 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.04
TREX1-203ENST00000456089 DIS3Q9Y2L1 958 aaKnown RBP15.33■□□□□ 0.04
TREX1-203ENST00000456089 LRRC37A2A6NM11 1700 aa15.33■□□□□ 0.04
TREX1-203ENST00000456089 DNAJC25-GNG10A0A024R161 153 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 TRIM43BA6NCK2 446 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 MCCP23508 829 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
TREX1-203ENST00000456089 KCTD1Q719H9 257 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 PLEKHM2Q8IWE5 1019 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 GMCL1P1Q8NEA9 526 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 BADQ92934 168 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 TRIM43Q96BQ3 446 aaPredicted RBP15.32■□□□□ 0.04
TREX1-203ENST00000456089 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 FGD4Q96M96 766 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 PDLIM7Q9NR12 457 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 IL17RBQ9NRM6 502 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 STX8Q9UNK0 236 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 CNPY2Q9Y2B0 182 aa15.32■□□□□ 0.04
TREX1-203ENST00000456089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
TREX1-203ENST00000456089 DDX49Q9Y6V7 483 aaKnown RBP15.32■□□□□ 0.04
TREX1-203ENST00000456089 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 A0A1W2PQ45 241 aaPredicted RBP15.31■□□□□ 0.04
TREX1-203ENST00000456089 A0A1W2PQY0 241 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 ADCY6O43306 1168 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 AKR1A1P14550 325 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 CNTN2Q02246 1040 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 TLE2Q04725 743 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 SNX17Q15036 470 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms