RNA–Protein interactions for RNA: ENST00000455987.5

SYCP1-203, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best)

Gene SYCP1, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-203ENST00000455987 MCM9Q9NXL9 1143 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 TLR7Q9NYK1 1049 aaKnown RBP7.12□□□□□ -1.27
SYCP1-203ENST00000455987 ZNF214Q9UL59 606 aaPredicted RBP7.12□□□□□ -1.27
SYCP1-203ENST00000455987 FAM184BQ9ULE4 1060 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 BAZ2AQ9UIF9 1905 aaKnown RBP7.12□□□□□ -1.27
SYCP1-203ENST00000455987 ARVCFO00192 962 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 SNAI1O95863 264 aaPredicted RBP7.12□□□□□ -1.27
SYCP1-203ENST00000455987 ACRP10323 421 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 STAT3P40763 770 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 EVX2Q03828 476 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 ICA1Q05084 483 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 MAMDC4Q6UXC1 1216 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 FAM126BQ8IXS8 530 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 CRNKL1Q9BZJ0 848 aaKnown RBP7.12□□□□□ -1.27
SYCP1-203ENST00000455987 NKX2-4Q9H2Z4 354 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 ANTXR1Q9H6X2 564 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 SWAP70Q9UH65 585 aa7.12□□□□□ -1.27
SYCP1-203ENST00000455987 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
SYCP1-203ENST00000455987 MAGEB6P1A0A0J9YX57 407 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 A0A0U1RQG5 324 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 MYADML2A6NDP7 307 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 VWA5AO00534 786 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 SURF6O75683 361 aaKnown RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 ASGR1P07306 291 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 TRIM27P14373 513 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 REPS2Q8NFH8 660 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 EAF2Q96CJ1 260 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 PPP1R12CQ9BZL4 782 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 UPF3AQ9H1J1 476 aaKnown RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 RNF216Q9NWF9 866 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 PPP1R9AQ9ULJ8 1098 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 YBX2Q9Y2T7 364 aaKnown RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 HCN4Q9Y3Q4 1203 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 TLR3O15455 904 aaKnown RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 C6orf222P0C671 652 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 AKR1B1P15121 316 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 SAMD1Q6SPF0 538 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 ZNF467Q7Z7K2 595 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 CCDC17Q96LX7 622 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 LRFN3Q9BTN0 628 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 CCDC8Q9H0W5 538 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 DCP1AQ9NPI6 582 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 FBXO28Q9NVF7 368 aa7.11□□□□□ -1.27
SYCP1-203ENST00000455987 ZHX1Q9UKY1 873 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-203ENST00000455987 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 APBB1O00213 710 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 ERC2O15083 957 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 CD4P01730 458 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 FGBP02675 491 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 GJA9P57773 515 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 NKX3-2P78367 333 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 ATP8B2P98198 1209 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 TEX13BQ9BXU2 312 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 SPC25Q9HBM1 224 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 GREB1LQ9C091 1923 aaPredicted RBP7.1□□□□□ -1.27
SYCP1-203ENST00000455987 LRRC37A2A6NM11 1700 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 CYP2D6P10635 497 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 PDE6AP16499 860 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 POU3F3P20264 500 aaPredicted RBP7.1□□□□□ -1.27
SYCP1-203ENST00000455987 CYP2C18P33260 490 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 TFF2Q03403 129 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 ACVR2BQ13705 512 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.1□□□□□ -1.27
SYCP1-203ENST00000455987 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 DYNLL2Q96FJ2 89 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 ABHD16BQ9H3Z7 469 aa7.1□□□□□ -1.27
SYCP1-203ENST00000455987 ADCY6O43306 1168 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 EEF2P13639 858 aaKnown RBP7.09□□□□□ -1.27
SYCP1-203ENST00000455987 KCNQ1P51787 676 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 IRX5P78411 483 aaPredicted RBP7.09□□□□□ -1.27
SYCP1-203ENST00000455987 TTF1Q15361 905 aaPredicted RBP7.09□□□□□ -1.27
SYCP1-203ENST00000455987 GNASQ5JWF2 1037 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 SLC9C2Q5TAH2 1124 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 PPP2R2DQ66LE6 453 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 SLC43A3Q8NBI5 491 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 SDR42E1Q8WUS8 393 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 DDX11Q96FC9 970 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 EPHX3Q9H6B9 360 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 KANSL2Q9H9L4 492 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 GOPCQ9HD26 462 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.09□□□□□ -1.27
SYCP1-203ENST00000455987 TNNQ9UQP3 1299 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 PCDHA11Q9Y5I1 949 aa7.09□□□□□ -1.27
SYCP1-203ENST00000455987 CTAGE5O15320 804 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 BCAR3O75815 825 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 CCDC144BQ3MJ40 725 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 TMEM31Q5JXX7 168 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 LCORLQ8N3X6 602 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 SEZ6LQ9BYH1 1024 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 HIPK3Q9H422 1215 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 SLC4A7Q9Y6M7 1214 aa7.09□□□□□ -1.28
SYCP1-203ENST00000455987 XIRP2A4UGR9 3374 aa7.08□□□□□ -1.28
SYCP1-203ENST00000455987 TCRBV5S4A2TA0A5A2 114 aa7.08□□□□□ -1.28
SYCP1-203ENST00000455987 ATP2A1O14983 1001 aa7.08□□□□□ -1.28
SYCP1-203ENST00000455987 CABYRO75952 493 aa7.08□□□□□ -1.28
SYCP1-203ENST00000455987 FAM83BQ5T0W9 1011 aa7.08□□□□□ -1.28
SYCP1-203ENST00000455987 SNRNP48Q6IEG0 339 aaKnown RBP7.08□□□□□ -1.28
SYCP1-203ENST00000455987 OTOP2Q7RTS6 562 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms