RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 CUL9Q8IWT3 2517 aa22.37■■□□□ 1.17
COL20A1-204ENST00000455906 CDH23Q9H251 3354 aa22.36■■□□□ 1.17
COL20A1-204ENST00000455906 TTC41PQ6P2S7 1318 aa22.36■■□□□ 1.17
COL20A1-204ENST00000455906 PATL2C9JE40 543 aaKnown RBP22.36■■□□□ 1.17
COL20A1-204ENST00000455906 POTEB2H3BUK9 544 aa22.36■■□□□ 1.17
COL20A1-204ENST00000455906 ATP2A1O14983 1001 aa22.36■■□□□ 1.17
COL20A1-204ENST00000455906 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
COL20A1-204ENST00000455906 OTUD7AQ8TE49 926 aaPredicted RBP22.36■■□□□ 1.17
COL20A1-204ENST00000455906 MTMR4Q9NYA4 1195 aa22.36■■□□□ 1.17
COL20A1-204ENST00000455906 DNAJC25-GNG10A0A024R161 153 aa22.35■■□□□ 1.17
COL20A1-204ENST00000455906 PGK1P00558 417 aa22.35■■□□□ 1.17
COL20A1-204ENST00000455906 APPP05067 770 aa22.35■■□□□ 1.17
COL20A1-204ENST00000455906 SH3RF1Q7Z6J0 888 aa22.35■■□□□ 1.17
COL20A1-204ENST00000455906 ZNF444Q8N0Y2 327 aaPredicted RBP22.35■■□□□ 1.17
COL20A1-204ENST00000455906 LENG1Q96BZ8 264 aaPredicted RBP22.35■■□□□ 1.17
COL20A1-204ENST00000455906 PRDM5Q9NQX1 630 aaPredicted RBP22.35■■□□□ 1.17
COL20A1-204ENST00000455906 PLIN4Q96Q06 1357 aa22.35■■□□□ 1.17
COL20A1-204ENST00000455906 EYSQ5T1H1 3165 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 TRIM43BA6NCK2 446 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 AKR1A1P14550 325 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 RNF180Q86T96 592 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 MSL3Q8N5Y2 521 aaKnown RBP22.34■■□□□ 1.17
COL20A1-204ENST00000455906 TRIM43Q96BQ3 446 aaPredicted RBP22.34■■□□□ 1.17
COL20A1-204ENST00000455906 SLC38A10Q9HBR0 1119 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 ZNF287Q9HBT7 754 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 SYNPO2Q9UMS6 1093 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 MCM3APO60318 1980 aa22.34■■□□□ 1.17
COL20A1-204ENST00000455906 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 SNAI1O95863 264 aaPredicted RBP22.33■■□□□ 1.17
COL20A1-204ENST00000455906 TTLL1O95922 423 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 TLE2Q04725 743 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 LRRFIP1Q32MZ4 808 aaKnown RBP22.33■■□□□ 1.17
COL20A1-204ENST00000455906 FAM109BQ6ICB4 259 aaPredicted RBP22.33■■□□□ 1.17
COL20A1-204ENST00000455906 MAMDC4Q6UXC1 1216 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL20A1-204ENST00000455906 CPXCR1Q8N123 301 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 LRRC47Q8N1G4 583 aaKnown RBP22.33■■□□□ 1.17
COL20A1-204ENST00000455906 BADQ92934 168 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 KIFC2Q96AC6 838 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 CNPY2Q9Y2B0 182 aa22.33■■□□□ 1.17
COL20A1-204ENST00000455906 SYNGAP1Q96PV0 1343 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 ERC2O15083 957 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 ZBED4O75132 1171 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 SHHQ15465 462 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 ZMYM1Q5SVZ6 1142 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 C9orf50Q5SZB4 431 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 GMCL1P1Q8NEA9 526 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 NEDD1Q8NHV4 660 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 DDX11Q96FC9 970 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 RAVER2Q9HCJ3 691 aaKnown RBP22.32■■□□□ 1.16
COL20A1-204ENST00000455906 FEM1BQ9UK73 627 aa22.32■■□□□ 1.16
COL20A1-204ENST00000455906 A0A1W2PQ45 241 aaPredicted RBP22.31■■□□□ 1.16
COL20A1-204ENST00000455906 A0A1W2PQY0 241 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 ITGB8P26012 769 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 FGD4Q96M96 766 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 GUCD1Q96NT3 240 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 FSD1Q9BTV5 496 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 NACAP1Q9BZK3 213 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 SYNRGQ9UMZ2 1314 aa22.31■■□□□ 1.16
COL20A1-204ENST00000455906 DLL1O00548 723 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 FOXP2O15409 715 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 TSPY3P0CV98 308 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 TSPY8P0CW00 308 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 PPARAQ07869 468 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 ZNF467Q7Z7K2 595 aaPredicted RBP22.3■■□□□ 1.16
COL20A1-204ENST00000455906 SALL3Q9BXA9 1300 aa22.3■■□□□ 1.16
COL20A1-204ENST00000455906 OAZ1P54368 228 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 PDE4BQ07343 736 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 SLFN13Q68D06 897 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 CCSAPQ6IQ19 270 aaPredicted RBP22.29■■□□□ 1.16
COL20A1-204ENST00000455906 KLHDC9Q8NEP7 349 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 TSEN34Q9BSV6 310 aaKnown RBP22.29■■□□□ 1.16
COL20A1-204ENST00000455906 NAPBQ9H115 298 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 FAM184BQ9ULE4 1060 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 CTDP1Q9Y5B0 961 aaPredicted RBP22.29■■□□□ 1.16
COL20A1-204ENST00000455906 TACC3Q9Y6A5 838 aa22.29■■□□□ 1.16
COL20A1-204ENST00000455906 CLTBP09497 229 aa22.28■■□□□ 1.16
COL20A1-204ENST00000455906 BMP3P12645 472 aa22.28■■□□□ 1.16
COL20A1-204ENST00000455906 MX1P20591 662 aa22.28■■□□□ 1.16
COL20A1-204ENST00000455906 TFAP4Q01664 338 aa22.28■■□□□ 1.16
COL20A1-204ENST00000455906 CHST13Q8NET6 341 aa22.28■■□□□ 1.16
COL20A1-204ENST00000455906 FBXO40Q9UH90 709 aa22.28■■□□□ 1.16
COL20A1-204ENST00000455906 ZHX1Q9UKY1 873 aaPredicted RBP22.28■■□□□ 1.16
COL20A1-204ENST00000455906 MYADML2A6NDP7 307 aa22.27■■□□□ 1.16
COL20A1-204ENST00000455906 KIAA0355O15063 1070 aa22.27■■□□□ 1.16
COL20A1-204ENST00000455906 ADCY6O43306 1168 aa22.27■■□□□ 1.16
COL20A1-204ENST00000455906 ACLYP53396 1101 aa22.27■■□□□ 1.16
COL20A1-204ENST00000455906 ANKRD35Q8N283 1001 aa22.27■■□□□ 1.16
COL20A1-204ENST00000455906 FAM161BQ96MY7 647 aa22.27■■□□□ 1.16
COL20A1-204ENST00000455906 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.27■■□□□ 1.16
COL20A1-204ENST00000455906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.27■■□□□ 1.16
COL20A1-204ENST00000455906 TMEM232C9JQI7 657 aa22.26■■□□□ 1.15
COL20A1-204ENST00000455906 PQBP1O60828 265 aaKnown RBP22.26■■□□□ 1.15
COL20A1-204ENST00000455906 DUSP11O75319 330 aaKnown RBP22.26■■□□□ 1.15
COL20A1-204ENST00000455906 SLC3A2P08195 630 aaKnown RBP22.26■■□□□ 1.15
COL20A1-204ENST00000455906 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
COL20A1-204ENST00000455906 ACVR2BQ13705 512 aa22.26■■□□□ 1.15
COL20A1-204ENST00000455906 CCDC129Q6ZRS4 1044 aa22.26■■□□□ 1.15
COL20A1-204ENST00000455906 GMCL1Q96IK5 515 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms