RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TTLL7Q6ZT98 887 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 EPHB4P54760 987 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 LGSNQ5TDP6 509 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 VSTM4Q8IW00 320 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-207ENST00000453963 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
SEC16A-207ENST00000453963 CTSWP56202 376 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 RETREG2Q8NC44 543 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 SUPT20HQ8NEM7 779 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 ENOX1Q8TC92 643 aaKnown RBP13.26□□□□□ -0.29
SEC16A-207ENST00000453963 MIPOL1Q8TD10 442 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 PICK1Q9NRD5 415 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 ERVK-7P63135 1459 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 ARHGEF35A5YM69 484 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 CA8P35219 290 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 FOXP1Q9H334 677 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-207ENST00000453963 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 KDM3AQ9Y4C1 1321 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 EXOC3O60645 756 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 EEF1GP26641 437 aaKnown RBP13.26□□□□□ -0.29
SEC16A-207ENST00000453963 PDE6BP35913 854 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 ZMYM1Q5SVZ6 1142 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 GALNT17Q6IS24 598 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 P3H4Q92791 437 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
SEC16A-207ENST00000453963 XRCC5P13010 732 aaKnown RBP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 ERCC3P19447 782 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 SNCBQ16143 134 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 KIF3CO14782 793 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 SLC8A3P57103 927 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 RESTQ13127 1097 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 NCAPH2Q6IBW4 605 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 TROVE2P10155 538 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 PDE6AP16499 860 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 HSPA1LP34931 641 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 SLC1A4P43007 532 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 SYMPKQ92797 1274 aaKnown RBP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 MRRFQ96E11 262 aaKnown RBP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 ZSCAN10Q96SZ4 725 aaPredicted RBP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 TBC1D7Q9P0N9 293 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 I3L4J1 428 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 SNX16P57768 344 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 TFAP4Q01664 338 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 GUCY2DQ02846 1103 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 PPARDQ03181 441 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 SDCCAG8Q86SQ7 713 aaPredicted RBP13.25□□□□□ -0.29
SEC16A-207ENST00000453963 PLEKHA4Q9H4M7 779 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
SEC16A-207ENST00000453963 BUB1O43683 1085 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 H2AFZP0C0S5 128 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 GCKP35557 465 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 BAG6P46379 1132 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 SH3BGRP55822 239 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 H2AFVQ71UI9 128 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 MAPKAPK5Q8IW41 473 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 ANKRD42Q8N9B4 389 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 ARPP21Q9UBL0 812 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 RNF14Q9UBS8 474 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 GCNT3O95395 438 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 KIF23Q02241 960 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 RBL2Q08999 1139 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 UBE3CQ15386 1083 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 PHLDB3Q6NSJ2 640 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 MRPL44Q9H9J2 332 aaKnown RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 STK38LQ9Y2H1 464 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 TAF12Q16514 161 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 ARMCX3Q9UH62 379 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 DBNLQ9UJU6 430 aaKnown RBP13.24□□□□□ -0.29
SEC16A-207ENST00000453963 TNKSO95271 1327 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 SCG2P13521 617 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 PTGDRQ13258 359 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 MYCT1Q8N699 235 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 TUBGCP2Q9BSJ2 902 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
SEC16A-207ENST00000453963 OR52Z1P0C646 297 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 HNRNPH2P55795 449 aaKnown RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 CCDC117Q8IWD4 279 aaPredicted RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 MGARPQ8TDB4 240 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 HOOK2Q96ED9 719 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms