RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 SOCS4Q8WXH5 440 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
VCX3B-204ENST00000453306 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
VCX3B-204ENST00000453306 UBAC1Q9BSL1 405 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 AGXT2Q9BYV1 514 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 VCPKMTQ9H867 229 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 GJD2Q9UKL4 321 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 BRPF3Q9ULD4 1205 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 RPTORQ8N122 1335 aa18.37■□□□□ 0.53
VCX3B-204ENST00000453306 A0A1W2PPC1 479 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 PSMA5P28066 241 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 MAPK4P31152 587 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 HERVK_113P62684 666 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
VCX3B-204ENST00000453306 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 Q6ZUG5 572 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 WDR19Q8NEZ3 1342 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 PAWRQ96IZ0 340 aaKnown RBP18.36■□□□□ 0.53
VCX3B-204ENST00000453306 TMEM87BQ96K49 555 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 P2RX7Q99572 595 aaKnown RBP18.36■□□□□ 0.53
VCX3B-204ENST00000453306 NUDT12Q9BQG2 462 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 ARHGEF10LQ9HCE6 1279 aa18.36■□□□□ 0.53
VCX3B-204ENST00000453306 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
VCX3B-204ENST00000453306 FEZ1Q99689 392 aa18.35■□□□□ 0.53
VCX3B-204ENST00000453306 MTA3Q9BTC8 594 aa18.35■□□□□ 0.53
VCX3B-204ENST00000453306 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
VCX3B-204ENST00000453306 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 XRCC5P13010 732 aaKnown RBP18.34■□□□□ 0.53
VCX3B-204ENST00000453306 VCAM1P19320 739 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 WTAPQ15007 396 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 RAB11FIP4Q86YS3 637 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 FBXL16Q8N461 479 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 MYL10Q9BUA6 226 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 PRO3102Q9H379 93 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
VCX3B-204ENST00000453306 CYP2B6P20813 491 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 LIFRP42702 1097 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 TROAPQ12815 778 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 IFIT1BQ5T764 474 aaKnown RBP18.33■□□□□ 0.52
VCX3B-204ENST00000453306 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 PNMA1Q8ND90 353 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 CWC22Q9HCG8 908 aaKnown RBP18.33■□□□□ 0.52
VCX3B-204ENST00000453306 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.52
VCX3B-204ENST00000453306 PDHBP11177 359 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 NEK4P51957 841 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 USP14P54578 494 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 ERVK-24P63145 666 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 BRF1Q92994 677 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
VCX3B-204ENST00000453306 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
VCX3B-204ENST00000453306 FBXO28Q9NVF7 368 aa18.32■□□□□ 0.52
VCX3B-204ENST00000453306 PEX10O60683 326 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
VCX3B-204ENST00000453306 RXRAP19793 462 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 RGS2P41220 211 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 AK2P54819 239 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 EVCP57679 992 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 CCNA1P78396 465 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 KCTD1Q719H9 257 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 TRIB2Q92519 343 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 GMCL1Q96IK5 515 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 CPVLQ9H3G5 476 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
VCX3B-204ENST00000453306 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 FAM217BQ9NTX9 383 aaPredicted RBP18.31■□□□□ 0.52
VCX3B-204ENST00000453306 RBPJLQ9UBG7 517 aa18.31■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 RAD21O60216 631 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
VCX3B-204ENST00000453306 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 TRIM32Q13049 653 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 PLEKHH3Q7Z736 793 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 ZNF654Q8IZM8 581 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 DIS3LQ8TF46 1054 aaKnown RBP18.3■□□□□ 0.52
VCX3B-204ENST00000453306 LPAR1Q92633 364 aa18.3■□□□□ 0.52
VCX3B-204ENST00000453306 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms