RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 HYOU1Q9Y4L1 999 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 CEP170Q5SW79 1584 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 MAST1Q9Y2H9 1570 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 ATP10AO60312 1499 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 SLC39A14Q15043 492 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 B4GALNT4Q76KP1 1039 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 TPH2Q8IWU9 490 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 BLIDQ8IZY5 108 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 OXER1Q8TDS5 423 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 FAM135BQ49AJ0 1406 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 DCAF8L1A6NGE4 600 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 PNMA6AP0CW24 399 aaPredicted RBP8.57□□□□□ -1.04
RIF1-206ENST00000453091 RASA3Q14644 834 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 ZMYM1Q5SVZ6 1142 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 SPICE1Q8N0Z3 855 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 KRIT1O00522 736 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 EXOC3O60645 756 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 STAMBPO95630 424 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 CRKLP46109 303 aaKnown RBP8.57□□□□□ -1.04
RIF1-206ENST00000453091 SMC6Q96SB8 1091 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 PTPN22Q9Y2R2 807 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 CDC25BP30305 580 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 MAP2K2P36507 400 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 IFT88Q13099 833 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 APOA5Q6Q788 366 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 POTEDQ86YR6 584 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 CNOT6LQ96LI5 555 aaKnown RBP8.57□□□□□ -1.04
RIF1-206ENST00000453091 MTUS1Q9ULD2 1270 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 TAF6LQ9Y6J9 622 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 KIF28PB7ZC32 967 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 PSMC4P43686 418 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 CYP4A11Q02928 519 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 STMN4Q9H169 189 aaPredicted RBP8.57□□□□□ -1.04
RIF1-206ENST00000453091 MRPL44Q9H9J2 332 aaKnown RBP8.57□□□□□ -1.04
RIF1-206ENST00000453091 ARHGEF10O15013 1369 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 HLFQ16534 295 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 FRMD4BQ9Y2L6 1034 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 NCK2O43639 380 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 PSMD6Q15008 389 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 VSTM4Q8IW00 320 aa8.57□□□□□ -1.04
RIF1-206ENST00000453091 BTDP43251 543 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 PTPN12Q05209 780 aaKnown RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 FAM133BQ5BKY9 247 aaKnown RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 ZNF365Q70YC5 407 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 GOLGA5Q8TBA6 731 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 EPB41L5Q9HCM4 733 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 AGTPBP1Q9UPW5 1226 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 MBD5Q9P267 1494 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 MEIS1O00470 390 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 TXNDC9O14530 226 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 SNX1Q13596 522 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 TRIP13Q15645 432 aaPredicted RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 AP1M1Q9BXS5 423 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 MTF1Q14872 753 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 ZKSCAN8Q15776 578 aaPredicted RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 GKAP1Q5VSY0 366 aaPredicted RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 RCOR1Q9UKL0 485 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 GDAQ9Y2T3 454 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 A0A0G2JLW4 131 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 CLTAP09496 248 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 PRPHP41219 470 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 TERF2Q15554 542 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 DBNDD1Q9H9R9 158 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 HDAC6Q9UBN7 1215 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 HOXB7P09629 217 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 LARGE2Q8N3Y3 721 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 TTC14Q96N46 770 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 NUP58Q9BVL2 599 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 CALUO43852 315 aaPredicted RBP8.56□□□□□ -1.04
RIF1-206ENST00000453091 GDF11O95390 407 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 PLEKHA8P1O95397 391 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 KRT15P19012 456 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 ATP11AP98196 1134 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 PPFIA1Q13136 1202 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 HHATQ5VTY9 493 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 KRT25Q7Z3Z0 450 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 LRRC45Q96CN5 670 aa8.56□□□□□ -1.04
RIF1-206ENST00000453091 TEX33O43247 280 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 STX10O60499 249 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TRIM37O94972 964 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 RPS8P62241 208 aaKnown RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 PRR16Q569H4 304 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TSNARE1Q96NA8 513 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 PLVAPQ9BX97 442 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TMEM94Q12767 1356 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 CLIC2O15247 247 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TBC1D8O95759 1140 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 CYP2D6P10635 497 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 BSPRYQ5W0U4 402 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TBC1D10CQ8IV04 446 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 CD2APQ9Y5K6 639 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 ZNF335Q9H4Z2 1342 aaPredicted RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 GTPBP6O43824 516 aaPredicted RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 HEXIM1O94992 359 aaKnown RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 PPP2R5CQ13362 524 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 GOLGA8KD6RF30 607 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms