RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 FGRP09769 529 aa14.81□□□□□ -0.04
CPSF4-208ENST00000452047 COPB2P35606 906 aa14.81□□□□□ -0.04
CPSF4-208ENST00000452047 FXR1P51114 621 aaKnown RBP eCLIP14.81□□□□□ -0.04
CPSF4-208ENST00000452047 NMIQ13287 307 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-208ENST00000452047 MMP19Q99542 508 aa14.81□□□□□ -0.04
CPSF4-208ENST00000452047 IL17RBQ9NRM6 502 aa14.81□□□□□ -0.04
CPSF4-208ENST00000452047 RBM27Q9P2N5 1060 aaKnown RBP14.81□□□□□ -0.04
CPSF4-208ENST00000452047 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
CPSF4-208ENST00000452047 TSPY2A6NKD2 308 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 TRIM6-TRIM34B2RNG4 842 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 ORC4O43929 436 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 FGAP02671 866 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 HSPD1P10809 573 aaKnown RBP14.8□□□□□ -0.04
CPSF4-208ENST00000452047 CNGA1P29973 690 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 NOVP48745 357 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 SNRNP48Q6IEG0 339 aaKnown RBP14.8□□□□□ -0.04
CPSF4-208ENST00000452047 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 RIPK3Q9Y572 518 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
CPSF4-208ENST00000452047 NMT2O60551 498 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 PGK2P07205 417 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 BMP3P12645 472 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 KCTD2Q14681 263 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 ZNF792Q3KQV3 632 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
CPSF4-208ENST00000452047 C7orf61Q8IZ16 206 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 RILPL2Q969X0 211 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 KIFC2Q96AC6 838 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 GMCL1Q96IK5 515 aa14.79□□□□□ -0.04
CPSF4-208ENST00000452047 DIS3Q9Y2L1 958 aaKnown RBP14.79□□□□□ -0.04
CPSF4-208ENST00000452047 SMCHD1A6NHR9 2005 aa14.78□□□□□ -0.04
CPSF4-208ENST00000452047 SEPT4O43236 478 aa14.78□□□□□ -0.04
CPSF4-208ENST00000452047 RANBP6O60518 1105 aaKnown RBP14.78□□□□□ -0.04
CPSF4-208ENST00000452047 SDSP20132 328 aa14.78□□□□□ -0.04
CPSF4-208ENST00000452047 PRAMEF19Q5SWL8 479 aa14.78□□□□□ -0.04
CPSF4-208ENST00000452047 STX8Q9UNK0 236 aa14.78□□□□□ -0.04
CPSF4-208ENST00000452047 DNAJC25-GNG10A0A024R161 153 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 DNM1LO00429 736 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 ZBED4O75132 1171 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 STAT2P52630 851 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 OAZ1P54368 228 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 RASGRP2Q7LDG7 609 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 CPXCR1Q8N123 301 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 TINF2Q9BSI4 451 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
CPSF4-208ENST00000452047 NRBP1Q9UHY1 535 aa14.77□□□□□ -0.05
CPSF4-208ENST00000452047 MCM3APO60318 1980 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 ZNF536O15090 1300 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 PLA2G6O60733 806 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 FDX1P10109 184 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 MCCP23508 829 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 SLC1A4P43007 532 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 HAND2P61296 217 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 ANO1Q5XXA6 986 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 FAM160B2Q86V87 743 aa14.76□□□□□ -0.05
CPSF4-208ENST00000452047 ZMYND8Q9ULU4 1186 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-208ENST00000452047 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
CPSF4-208ENST00000452047 KCTD1Q719H9 257 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 TBC1D10CQ8IV04 446 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 MSL3Q8N5Y2 521 aaKnown RBP14.75□□□□□ -0.05
CPSF4-208ENST00000452047 CHST13Q8NET6 341 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 CHURC1Q8WUH1 139 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 STAG1Q8WVM7 1258 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 CHMP4CQ96CF2 233 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 GDF15Q99988 308 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 SENP6Q9GZR1 1112 aaPredicted RBP14.75□□□□□ -0.05
CPSF4-208ENST00000452047 TCP11L1Q9NUJ3 509 aa14.75□□□□□ -0.05
CPSF4-208ENST00000452047 CTDP1Q9Y5B0 961 aaPredicted RBP14.75□□□□□ -0.05
CPSF4-208ENST00000452047 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 A0A1W2PPC1 479 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 ZNF865P0CJ78 1059 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 PCP11498 1178 aaKnown RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 TAL1P17542 331 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 SYN1P17600 705 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 PDE4AP27815 886 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 RRP12Q5JTH9 1297 aaKnown RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 AKNAD1Q5T1N1 836 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 GJC2Q5T442 439 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 RCSD1Q6JBY9 416 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 CWC27Q6UX04 472 aaKnown RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 MAMDC4Q6UXC1 1216 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 ARRDC4Q8NCT1 418 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 DDX11Q96FC9 970 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 FGD4Q96M96 766 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 TOMM22Q9NS69 142 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 FBXO40Q9UH90 709 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 ISY1Q9ULR0 285 aaKnown RBP14.74□□□□□ -0.05
CPSF4-208ENST00000452047 LCTP09848 1927 aa14.74□□□□□ -0.05
CPSF4-208ENST00000452047 LTBP2Q14767 1821 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 NEDD4P46934 1319 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 LRRC37A2A6NM11 1700 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 BMP8BP34820 402 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 SLC4A3P48751 1232 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 IKQ13123 557 aaPredicted RBP14.73□□□□□ -0.05
CPSF4-208ENST00000452047 LRRC41Q15345 812 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms