RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 MTMR4Q9NYA4 1195 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 CLIP2Q9UDT6 1046 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 ATP11BQ9Y2G3 1177 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 SALL3Q9BXA9 1300 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 PLIN4Q96Q06 1357 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 DNAJC25-GNG10A0A024R161 153 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 FOXP2O15409 715 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 APPP05067 770 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 COPB2P35606 906 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 TRIM60Q495X7 471 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 SNRNP48Q6IEG0 339 aaKnown RBP11.8□□□□□ -0.52
LINC01238-204ENST00000451070 ZNF444Q8N0Y2 327 aaPredicted RBP11.8□□□□□ -0.52
LINC01238-204ENST00000451070 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
LINC01238-204ENST00000451070 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
LINC01238-204ENST00000451070 ERC2O15083 957 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 SNAI1O95863 264 aaPredicted RBP11.79□□□□□ -0.52
LINC01238-204ENST00000451070 TTLL1O95922 423 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 PGK1P00558 417 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 RARBP10826 455 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 MX1P20591 662 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 LRRFIP1Q32MZ4 808 aaKnown RBP11.79□□□□□ -0.52
LINC01238-204ENST00000451070 C1orf53Q5VUE5 145 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC01238-204ENST00000451070 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
LINC01238-204ENST00000451070 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 LENG1Q96BZ8 264 aaPredicted RBP11.79□□□□□ -0.52
LINC01238-204ENST00000451070 LBHD1Q9BQE6 289 aaPredicted RBP11.79□□□□□ -0.52
LINC01238-204ENST00000451070 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 ZNF287Q9HBT7 754 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 XPNPEP3Q9NQH7 507 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 PDLIM7Q9NR12 457 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 SYNPO2Q9UMS6 1093 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
LINC01238-204ENST00000451070 ADAMTS4O75173 837 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 PPARAQ07869 468 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 MAMDC4Q6UXC1 1216 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 SH3RF1Q7Z6J0 888 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 CPXCR1Q8N123 301 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 FGD4Q96M96 766 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 NAPBQ9H115 298 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 RAVER2Q9HCJ3 691 aaKnown RBP11.78□□□□□ -0.52
LINC01238-204ENST00000451070 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 FEM1BQ9UK73 627 aa11.78□□□□□ -0.52
LINC01238-204ENST00000451070 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 ZBED4O75132 1171 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TSPY3P0CV98 308 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TSPY8P0CW00 308 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 AKR1A1P14550 325 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 RRP1P56182 461 aaKnown RBP11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TFAP4Q01664 338 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TLE2Q04725 743 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 PDE4BQ07343 736 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 SLFN13Q68D06 897 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 MSL3Q8N5Y2 521 aaKnown RBP11.77□□□□□ -0.53
LINC01238-204ENST00000451070 BADQ92934 168 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
LINC01238-204ENST00000451070 DDX11Q96FC9 970 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 NACAP1Q9BZK3 213 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 INCENPQ9NQS7 918 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.53
LINC01238-204ENST00000451070 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01238-204ENST00000451070 TACC3Q9Y6A5 838 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 SYNGAP1Q96PV0 1343 aa11.77□□□□□ -0.53
LINC01238-204ENST00000451070 A0A1W2PQ45 241 aaPredicted RBP11.76□□□□□ -0.53
LINC01238-204ENST00000451070 A0A1W2PQY0 241 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 ADCY6O43306 1168 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 BMP3P12645 472 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 ITGB8P26012 769 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 SHHQ15465 462 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 C9orf50Q5SZB4 431 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
LINC01238-204ENST00000451070 RNF180Q86T96 592 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 KLHDC9Q8NEP7 349 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 IL17RBQ9NRM6 502 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 SYNRGQ9UMZ2 1314 aa11.76□□□□□ -0.53
LINC01238-204ENST00000451070 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 OAZ1P54368 228 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 CTDSPL2Q05D32 466 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 ANKRD45Q5TZF3 282 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 FAM109BQ6ICB4 259 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 CCSAPQ6IQ19 270 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 RASGRP2Q7LDG7 609 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms