RNA–Protein interactions for RNA: ENST00000449405.1

LINC01939-202, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 3

Gene LINC01939, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-202ENST00000449405 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
LINC01939-202ENST00000449405 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
LINC01939-202ENST00000449405 ROBO3Q96MS0 1386 aa18.37■□□□□ 0.53
LINC01939-202ENST00000449405 F5H6K3 240 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 KLRC3Q07444 240 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 KCNA10Q16322 511 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 SBK1Q52WX2 424 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 TTC28Q96AY4 2481 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 NYAP2Q9P242 653 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 FAM184BQ9ULE4 1060 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
LINC01939-202ENST00000449405 TMEM265A0A087WTH1 108 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 RAD21O60216 631 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 RASA1P20936 1047 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 FPGSQ05932 587 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
LINC01939-202ENST00000449405 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 TEX13BQ9BXU2 312 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
LINC01939-202ENST00000449405 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 SYNRGQ9UMZ2 1314 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.34■□□□□ 0.53
LINC01939-202ENST00000449405 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.34■□□□□ 0.53
LINC01939-202ENST00000449405 GSG1L2A8MUP6 293 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 ATP2A1O14983 1001 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 NDUFB10O96000 172 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 TIMP1P01033 207 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 FOSL2P15408 326 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 CDK7P50613 346 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
LINC01939-202ENST00000449405 GRIN2CQ14957 1233 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 SNRNP48Q6IEG0 339 aaKnown RBP18.34■□□□□ 0.53
LINC01939-202ENST00000449405 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 C16orf59Q7L2K0 433 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 MIER1Q8N108 512 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 STARD7Q9NQZ5 370 aa18.34■□□□□ 0.53
LINC01939-202ENST00000449405 GREB1LQ9C091 1923 aaPredicted RBP18.33■□□□□ 0.53
LINC01939-202ENST00000449405 MYO9BQ13459 2157 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 IGKV6D-41A0A0C4DH26 115 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 MYADML2A6NDP7 307 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 MOXD2PA6NHM9 499 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 DUSP11O75319 330 aaKnown RBP18.33■□□□□ 0.52
LINC01939-202ENST00000449405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC01939-202ENST00000449405 ZNF467Q7Z7K2 595 aaPredicted RBP18.33■□□□□ 0.52
LINC01939-202ENST00000449405 MKL1Q969V6 931 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 ARPP21Q9UBL0 812 aaPredicted RBP18.33■□□□□ 0.52
LINC01939-202ENST00000449405 TBX21Q9UL17 535 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 MYH7P12883 1935 aa18.33■□□□□ 0.52
LINC01939-202ENST00000449405 ADCY6O43306 1168 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 SMARCA5O60264 1052 aaPredicted RBP18.32■□□□□ 0.52
LINC01939-202ENST00000449405 ACVR2BQ13705 512 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 GIMAP6Q6P9H5 292 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 CPXCR1Q8N123 301 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 STK11IPQ8N1F8 1099 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 FGD4Q96M96 766 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
LINC01939-202ENST00000449405 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 CLIP2Q9UDT6 1046 aa18.32■□□□□ 0.52
LINC01939-202ENST00000449405 ELP1O95163 1332 aa18.31■□□□□ 0.52
LINC01939-202ENST00000449405 DNAJB2P25686 324 aa18.31■□□□□ 0.52
LINC01939-202ENST00000449405 CST5P28325 142 aaPredicted RBP18.31■□□□□ 0.52
LINC01939-202ENST00000449405 MFSD5Q6N075 450 aa18.31■□□□□ 0.52
LINC01939-202ENST00000449405 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
LINC01939-202ENST00000449405 SLC38A10Q9HBR0 1119 aa18.31■□□□□ 0.52
LINC01939-202ENST00000449405 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
LINC01939-202ENST00000449405 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
LINC01939-202ENST00000449405 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
LINC01939-202ENST00000449405 MINDY4BA8MYZ0 360 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 ZBED4O75132 1171 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 SLC4A3P48751 1232 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 GJA9P57773 515 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 GLT1D1Q96MS3 346 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 UPF3AQ9H1J1 476 aaKnown RBP18.3■□□□□ 0.52
LINC01939-202ENST00000449405 ABHD16BQ9H3Z7 469 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 ZNF576Q9H609 170 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 MUC3AQ02505 3323 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 MCM3APO60318 1980 aa18.3■□□□□ 0.52
LINC01939-202ENST00000449405 CTAGE5O15320 804 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 ASGR1P07306 291 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 TMEM240Q5SV17 173 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 RASIP1Q5U651 963 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 USP38Q8NB14 1042 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
LINC01939-202ENST00000449405 KIFC2Q96AC6 838 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
LINC01939-202ENST00000449405 ARVCFO00192 962 aa18.28■□□□□ 0.52
LINC01939-202ENST00000449405 C6orf222P0C671 652 aaPredicted RBP18.28■□□□□ 0.52
LINC01939-202ENST00000449405 NKX3-2P78367 333 aa18.28■□□□□ 0.52
LINC01939-202ENST00000449405 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
LINC01939-202ENST00000449405 ANKRD35Q8N283 1001 aa18.28■□□□□ 0.52
LINC01939-202ENST00000449405 KBTBD3Q8NAB2 608 aa18.28■□□□□ 0.52
LINC01939-202ENST00000449405 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
LINC01939-202ENST00000449405 TIFAQ96CG3 184 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms