RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 FERMT2Q96AC1 680 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 LZTS2Q9BRK4 669 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 SPZ1Q9BXG8 430 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 DHX36Q9H2U1 1008 aaKnown RBP18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 PI4KBQ9UBF8 816 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 PYCARDQ9ULZ3 195 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 CLRN2A0PK11 232 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 STXBP3O00186 592 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 POLD1P28340 1107 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 TRAPPC10P48553 1259 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 NCAPHQ15003 741 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 POSTNQ15063 836 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 BLIDQ8IZY5 108 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 GMLQ99445 158 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 MTFR1LQ9H019 292 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 SERTAD1Q9UHV2 236 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 SMTNL1A8MU46 457 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 IKBKBO14920 756 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 TGFB2P61812 414 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 TPM4P67936 248 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 PIGSQ96S52 555 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
AP000253.1-201ENST00000449339 TCP10L2B9ZVM9 353 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 PTGDRQ13258 359 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 CCDC144BQ3MJ40 725 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 SPTLC3Q9NUV7 552 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 PCDHA4Q9UN74 947 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 ACTN4O43707 911 aaKnown RBP18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 ATP2C1P98194 919 aaPredicted RBP18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 CERKLQ49MI3 558 aaPredicted RBP18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 DALRD3Q5D0E6 543 aaKnown RBP18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 KANK3Q6NY19 840 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 NIM1KQ8IY84 436 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 EPSTI1Q96J88 318 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 ZNRF3Q9ULT6 936 aa18.34■□□□□ 0.53
AP000253.1-201ENST00000449339 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 GDF11O95390 407 aa18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 SPDYE6P0CI01 402 aa18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 LRMPQ12912 555 aa18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 TRIM34Q9BYJ4 488 aa18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.53
AP000253.1-201ENST00000449339 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.52
AP000253.1-201ENST00000449339 SNHG28P0DPA3 235 aa18.33■□□□□ 0.52
AP000253.1-201ENST00000449339 NT5DC1Q5TFE4 455 aa18.33■□□□□ 0.52
AP000253.1-201ENST00000449339 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.52
AP000253.1-201ENST00000449339 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
AP000253.1-201ENST00000449339 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
AP000253.1-201ENST00000449339 VWA3AA6NCI4 1184 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 M0R2N6 131 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 PRR29P0C7W0 189 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 BMP6P22004 513 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 CCDC148Q8NFR7 591 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
AP000253.1-201ENST00000449339 A0A087X0B3 334 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 RAD21O60216 631 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 ENTPD3O75355 529 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 MCM7P33993 719 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 NAPAP54920 295 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 JAG1P78504 1218 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 MYL5Q02045 173 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 CXCL9Q07325 125 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 SEPT2Q15019 361 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 DLGAP5Q15398 846 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 FER1L6Q2WGJ9 1857 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 SOGA3Q5TF21 947 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 ZNF70Q9UC06 446 aaPredicted RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 LMOD1P29536 600 aaPredicted RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 ZNF543Q08ER8 600 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 RRP1BQ14684 758 aaKnown RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 ASPRV1Q53RT3 343 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 DNTTIP2Q5QJE6 756 aaKnown RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 TATDN1Q6P1N9 297 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 KCTD1Q719H9 257 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 SMARCE1Q969G3 411 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 DHX58Q96C10 678 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 CSRNP1Q96S65 589 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 SEC63Q9UGP8 760 aaKnown RBP18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 MAN1B1Q9UKM7 699 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 ATRNL1Q5VV63 1379 aa18.31■□□□□ 0.52
AP000253.1-201ENST00000449339 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 FILIP1Q7Z7B0 1213 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 OGFOD1Q8N543 542 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 CCDC34Q96HJ3 373 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 HSD3B7Q9H2F3 369 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 IFNKQ9P0W0 207 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 SMC2O95347 1197 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms