RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 C9orf50Q5SZB4 431 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 FAM109BQ6ICB4 259 aaPredicted RBP18.54■□□□□ 0.56
TRA2A-203ENST00000448549 IFNL3Q8IZI9 196 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 KIFC2Q96AC6 838 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 DDX11Q96FC9 970 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 CEP95Q96GE4 821 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 FAM161BQ96MY7 647 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 ZNF287Q9HBT7 754 aa18.54■□□□□ 0.56
TRA2A-203ENST00000448549 PATL2C9JE40 543 aaKnown RBP18.53■□□□□ 0.56
TRA2A-203ENST00000448549 ZBED4O75132 1171 aa18.53■□□□□ 0.56
TRA2A-203ENST00000448549 MKL1Q969V6 931 aa18.53■□□□□ 0.56
TRA2A-203ENST00000448549 SEC62Q99442 399 aaKnown RBP18.53■□□□□ 0.56
TRA2A-203ENST00000448549 RAVER2Q9HCJ3 691 aaKnown RBP18.53■□□□□ 0.56
TRA2A-203ENST00000448549 MTMR4Q9NYA4 1195 aa18.53■□□□□ 0.56
TRA2A-203ENST00000448549 CTDP1Q9Y5B0 961 aaPredicted RBP18.53■□□□□ 0.56
TRA2A-203ENST00000448549 DNAJC25-GNG10A0A024R161 153 aa18.52■□□□□ 0.56
TRA2A-203ENST00000448549 ATP2A1O14983 1001 aa18.52■□□□□ 0.56
TRA2A-203ENST00000448549 SNAI1O95863 264 aaPredicted RBP18.52■□□□□ 0.56
TRA2A-203ENST00000448549 LRRFIP1Q32MZ4 808 aaKnown RBP18.52■□□□□ 0.56
TRA2A-203ENST00000448549 LRRC47Q8N1G4 583 aaKnown RBP18.52■□□□□ 0.56
TRA2A-203ENST00000448549 MSL3Q8N5Y2 521 aaKnown RBP18.52■□□□□ 0.56
TRA2A-203ENST00000448549 OTUD7AQ8TE49 926 aaPredicted RBP18.52■□□□□ 0.56
TRA2A-203ENST00000448549 GUCD1Q96NT3 240 aa18.52■□□□□ 0.56
TRA2A-203ENST00000448549 TACC3Q9Y6A5 838 aa18.52■□□□□ 0.56
TRA2A-203ENST00000448549 DNAH12Q6ZR08 3092 aa18.52■□□□□ 0.55
TRA2A-203ENST00000448549 A0A1W2PQ45 241 aaPredicted RBP18.51■□□□□ 0.55
TRA2A-203ENST00000448549 A0A1W2PQY0 241 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 ADAMTS4O75173 837 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 TTLL1O95922 423 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 ITGB8P26012 769 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 MAMDC4Q6UXC1 1216 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 PI4K2BQ8TCG2 481 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 NACAP1Q9BZK3 213 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 SLC38A10Q9HBR0 1119 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 FEM1BQ9UK73 627 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 ZHX1Q9UKY1 873 aaPredicted RBP18.51■□□□□ 0.55
TRA2A-203ENST00000448549 FAM184BQ9ULE4 1060 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
TRA2A-203ENST00000448549 TTC41PQ6P2S7 1318 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 SYNGAP1Q96PV0 1343 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 PQBP1O60828 265 aaKnown RBP18.5■□□□□ 0.55
TRA2A-203ENST00000448549 CLTBP09497 229 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 TSPY3P0CV98 308 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 TSPY8P0CW00 308 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 SLFN13Q68D06 897 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 GMCL1P1Q8NEA9 526 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 NEDD1Q8NHV4 660 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 FSD1Q9BTV5 496 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
TRA2A-203ENST00000448549 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 MYH8P13535 1937 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 ERC2O15083 957 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 ACLYP53396 1101 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 TFAP4Q01664 338 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 PDE4BQ07343 736 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 ZNF697Q5TEC3 545 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 TSEN34Q9BSV6 310 aaKnown RBP18.49■□□□□ 0.55
TRA2A-203ENST00000448549 NAPBQ9H115 298 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 PARP14Q460N5 1801 aa18.49■□□□□ 0.55
TRA2A-203ENST00000448549 KIAA0355O15063 1070 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
TRA2A-203ENST00000448549 BMP3P12645 472 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 PPARAQ07869 468 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 ACVR2BQ13705 512 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 KCNA10Q16322 511 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 ZNF467Q7Z7K2 595 aaPredicted RBP18.48■□□□□ 0.55
TRA2A-203ENST00000448549 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 CHMP4CQ96CF2 233 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 STARD7Q9NQZ5 370 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.48■□□□□ 0.55
TRA2A-203ENST00000448549 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
TRA2A-203ENST00000448549 ISY1Q9ULR0 285 aaKnown RBP18.48■□□□□ 0.55
TRA2A-203ENST00000448549 GREB1LQ9C091 1923 aaPredicted RBP18.47■□□□□ 0.55
TRA2A-203ENST00000448549 MYADML2A6NDP7 307 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 TMEM232C9JQI7 657 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 DUSP11O75319 330 aaKnown RBP18.47■□□□□ 0.55
TRA2A-203ENST00000448549 RAG1P15918 1043 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 OAZ1P54368 228 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 EPHB4P54760 987 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 IRX5P78411 483 aaPredicted RBP18.47■□□□□ 0.55
TRA2A-203ENST00000448549 CCSAPQ6IQ19 270 aaPredicted RBP18.47■□□□□ 0.55
TRA2A-203ENST00000448549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRA2A-203ENST00000448549 CHST13Q8NET6 341 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 FGD4Q96M96 766 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 TMEM39AQ9NV64 488 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 MYH7P12883 1935 aa18.47■□□□□ 0.55
TRA2A-203ENST00000448549 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
TRA2A-203ENST00000448549 PLIN4Q96Q06 1357 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 MOXD2PA6NHM9 499 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 ADCY6O43306 1168 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 ANKRD33Q7Z3H0 272 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 SEMA6BQ9H3T3 888 aa18.46■□□□□ 0.55
TRA2A-203ENST00000448549 LTBP2Q14767 1821 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 DCDC2CA8MYV0 355 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms