RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 PRDM10Q9NQV6 1147 aa8.04□□□□□ -1.12
USP49-205ENST00000448078 TMOD3Q9NYL9 352 aa8.04□□□□□ -1.12
USP49-205ENST00000448078 DAGLAQ9Y4D2 1042 aa8.04□□□□□ -1.12
USP49-205ENST00000448078 ACTL7BQ9Y614 415 aa8.04□□□□□ -1.12
USP49-205ENST00000448078 QSER1Q2KHR3 1735 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 SORBS3O60504 671 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 IGLV1-40P01703 118 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 CTCFP49711 727 aaPredicted RBP8.03□□□□□ -1.12
USP49-205ENST00000448078 ID3Q02535 119 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 LLGL2Q6P1M3 1020 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 GIPC2Q8TF65 315 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
USP49-205ENST00000448078 FAM83CQ9BQN1 747 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 SLC12A5Q9H2X9 1139 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 RNF19AQ9NV58 838 aa8.03□□□□□ -1.12
USP49-205ENST00000448078 ROCK2O75116 1388 aaKnown RBP8.02□□□□□ -1.13
USP49-205ENST00000448078 TIAF1O95411 115 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 CELA3AP09093 270 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 NFIAQ12857 509 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 MAP7Q14244 749 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 NBPF6Q5VWK0 638 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 PCNX4Q63HM2 1172 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 CDPF1Q6NVV7 123 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 C2CD4AQ8NCU7 369 aaPredicted RBP8.02□□□□□ -1.13
USP49-205ENST00000448078 PIGBQ92521 554 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 NBPF4Q96M43 638 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 MFSD14AQ96MC6 490 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 ATXN3LQ9H3M9 355 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 ATG3Q9NT62 314 aa8.02□□□□□ -1.13
USP49-205ENST00000448078 GLTPD2A6NH11 291 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 NFICP08651 508 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
USP49-205ENST00000448078 RNF43Q68DV7 783 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 STK35Q8TDR2 534 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 WDR89Q96FK6 387 aaPredicted RBP8.01□□□□□ -1.13
USP49-205ENST00000448078 TBC1D32Q96NH3 1257 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 PCDHA4Q9UN74 947 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 NFAT5O94916 1531 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
USP49-205ENST00000448078 QRICH2Q9H0J4 1663 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 MAP3K19Q56UN5 1328 aa8.01□□□□□ -1.13
USP49-205ENST00000448078 COL24A1Q17RW2 1714 aa8□□□□□ -1.13
USP49-205ENST00000448078 NSD2O96028 1365 aa8□□□□□ -1.13
USP49-205ENST00000448078 PIK3C2AO00443 1686 aa8□□□□□ -1.13
USP49-205ENST00000448078 WDR64B1ANS9 1081 aa8□□□□□ -1.13
USP49-205ENST00000448078 ENC1O14682 589 aa8□□□□□ -1.13
USP49-205ENST00000448078 PAGE1O75459 146 aa8□□□□□ -1.13
USP49-205ENST00000448078 DAB2P98082 770 aa8□□□□□ -1.13
USP49-205ENST00000448078 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
USP49-205ENST00000448078 SV2BQ7L1I2 683 aa8□□□□□ -1.13
USP49-205ENST00000448078 LINC00116Q8NCU8 138 aa8□□□□□ -1.13
USP49-205ENST00000448078 GRIN3AQ8TCU5 1115 aa8□□□□□ -1.13
USP49-205ENST00000448078 GPBAR1Q8TDU6 330 aa8□□□□□ -1.13
USP49-205ENST00000448078 ELMO3Q96BJ8 720 aa8□□□□□ -1.13
USP49-205ENST00000448078 DBNDD2Q9BQY9 259 aa8□□□□□ -1.13
USP49-205ENST00000448078 OSBPL1AQ9BXW6 950 aa8□□□□□ -1.13
USP49-205ENST00000448078 FAM105AQ9NUU6 356 aa8□□□□□ -1.13
USP49-205ENST00000448078 CSADQ9Y600 493 aa8□□□□□ -1.13
USP49-205ENST00000448078 WNK3Q9BYP7 1800 aa8□□□□□ -1.13
USP49-205ENST00000448078 KIAA1210Q9ULL0 1709 aa8□□□□□ -1.13
USP49-205ENST00000448078 RGPD5Q99666 1765 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.99□□□□□ -1.13
USP49-205ENST00000448078 ZNF862O60290 1169 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 RPS6KA4O75676 772 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
USP49-205ENST00000448078 HCLS1P14317 486 aaPredicted RBP7.99□□□□□ -1.13
USP49-205ENST00000448078 IFNL2Q8IZJ0 200 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 USHBP1Q8N6Y0 703 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 CARD11Q9BXL7 1154 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 PPP1R9AQ9ULJ8 1098 aa7.99□□□□□ -1.13
USP49-205ENST00000448078 SBNO2Q9Y2G9 1366 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 C10orf71Q711Q0 1435 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 CYP27B1O15528 508 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 GRIK1P39086 918 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 TAGLNQ01995 201 aaKnown RBP7.98□□□□□ -1.13
USP49-205ENST00000448078 TAF1CQ15572 869 aaPredicted RBP7.98□□□□□ -1.13
USP49-205ENST00000448078 MEI1Q5TIA1 1274 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 SMIM5Q71RC9 77 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 TMC4Q7Z404 712 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 SLC51AQ86UW1 340 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 SHKBP1Q8TBC3 707 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 CYP8B1Q9UNU6 501 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 CD163L1Q9NR16 1453 aa7.98□□□□□ -1.13
USP49-205ENST00000448078 DCDC2CA8MYV0 355 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 TMPRSS2O15393 492 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 SSTR4P31391 388 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 MAP2K1Q02750 393 aaPredicted RBP7.97□□□□□ -1.13
USP49-205ENST00000448078 TTLL4Q14679 1199 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 CDC37L1Q7L3B6 337 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 TTLL6Q8N841 843 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 ASAP1Q9ULH1 1129 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 RTL1A6NKG5 1358 aa7.97□□□□□ -1.13
USP49-205ENST00000448078 PXDNLA1KZ92 1463 aa7.96□□□□□ -1.13
USP49-205ENST00000448078 WDR90Q96KV7 1748 aa7.96□□□□□ -1.14
USP49-205ENST00000448078 PRAMEF27A3QJZ7 478 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms