RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MCMDC2Q4G0Z9 681 aa21.42■■□□□ 1.02
HMGA1-205ENST00000447654 GIGYF2Q6Y7W6 1299 aaKnown RBP21.42■■□□□ 1.02
HMGA1-205ENST00000447654 KIF9Q9HAQ2 790 aa21.42■■□□□ 1.02
HMGA1-205ENST00000447654 KCNH3Q9ULD8 1083 aa21.42■■□□□ 1.02
HMGA1-205ENST00000447654 DNAJC8O75937 253 aaPredicted RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 PCCAP05165 728 aaPredicted RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 STOX1Q6ZVD7 989 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 PAIP2Q9BPZ3 127 aaKnown RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 LRRC2Q9BYS8 371 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 IQSEC3Q9UPP2 1182 aaPredicted RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 PPFIA3O75145 1194 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 GHRP10912 638 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 ADORA1P30542 326 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 CASP14P31944 242 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 PTPAQ15257 358 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 LONRF3Q496Y0 759 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 SPATA1Q5VX52 437 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 KANK3Q6NY19 840 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 KBTBD3Q8NAB2 608 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 RASSF8Q8NHQ8 419 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 NCOA5Q9HCD5 579 aaKnown RBP21.41■■□□□ 1.02
HMGA1-205ENST00000447654 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 PLCH1Q4KWH8 1693 aa21.41■■□□□ 1.02
HMGA1-205ENST00000447654 CIAO1O76071 339 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 GYPCP04921 128 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 POSTNQ15063 836 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 GLE1Q53GS7 698 aaKnown RBP21.4■■□□□ 1.02
HMGA1-205ENST00000447654 NLRP10Q86W26 655 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 ARL8AQ96BM9 186 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 SCLT1Q96NL6 688 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 ABHD10Q9NUJ1 306 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 LRP6O75581 1613 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 TEX33O43247 280 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 CSF1RP07333 972 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 MDH1P40925 334 aaKnown RBP21.4■■□□□ 1.02
HMGA1-205ENST00000447654 ERVK-24P63145 666 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 RIPK1Q13546 671 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 SPECC1Q5M775 1068 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 ARFGAP2Q8N6H7 521 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 GDAP1L1Q96MZ0 367 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 DSCC1Q9BVC3 393 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 SAMSN1Q9NSI8 373 aaKnown RBP21.4■■□□□ 1.02
HMGA1-205ENST00000447654 PAG1Q9NWQ8 432 aa21.4■■□□□ 1.02
HMGA1-205ENST00000447654 CORO1CQ9ULV4 474 aaPredicted RBP21.4■■□□□ 1.02
HMGA1-205ENST00000447654 ERICH2A1L162 156 aa21.39■■□□□ 1.01
HMGA1-205ENST00000447654 AHCYL1O43865 530 aa21.39■■□□□ 1.01
HMGA1-205ENST00000447654 ECM2O94769 699 aaPredicted RBP21.39■■□□□ 1.01
HMGA1-205ENST00000447654 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.01
HMGA1-205ENST00000447654 ANKRD20A8PQ5CZ79 823 aa21.39■■□□□ 1.01
HMGA1-205ENST00000447654 FNBP4Q8N3X1 1017 aaPredicted RBP21.39■■□□□ 1.01
HMGA1-205ENST00000447654 TBC1D2BQ9UPU7 963 aa21.39■■□□□ 1.01
HMGA1-205ENST00000447654 EME2A4GXA9 379 aaPredicted RBP21.38■■□□□ 1.01
HMGA1-205ENST00000447654 MARCKSP29966 332 aaPredicted RBP21.38■■□□□ 1.01
HMGA1-205ENST00000447654 CDKAL1Q5VV42 579 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 JAKMIP2Q96AA8 810 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 RNPC3Q96LT9 517 aaKnown RBP21.38■■□□□ 1.01
HMGA1-205ENST00000447654 OSBPL9Q96SU4 736 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 SH3TC1Q8TE82 1336 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 A0A0G2JLW4 131 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 FESP07332 822 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 CAPRIN2Q6IMN6 1127 aaKnown RBP21.38■■□□□ 1.01
HMGA1-205ENST00000447654 CAGE1Q8TC20 777 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 BORCS6Q96GS4 357 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 SPAG5Q96R06 1193 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 EPN1Q9Y6I3 576 aaPredicted RBP21.38■■□□□ 1.01
HMGA1-205ENST00000447654 WNK3Q9BYP7 1800 aa21.38■■□□□ 1.01
HMGA1-205ENST00000447654 DOT1LQ8TEK3 1739 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 HMGB1P1B2RPK0 211 aaPredicted RBP21.37■■□□□ 1.01
HMGA1-205ENST00000447654 ATP1A1P05023 1023 aaKnown RBP21.37■■□□□ 1.01
HMGA1-205ENST00000447654 NR1D1P20393 614 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 DRAXINQ8NBI3 349 aaPredicted RBP21.37■■□□□ 1.01
HMGA1-205ENST00000447654 ACSBG1Q96GR2 724 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 GREM2Q9H772 168 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 SPATA31A1Q5TZJ5 1347 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 ABL1P00519 1130 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 FXR1P51114 621 aaKnown RBP eCLIP21.37■■□□□ 1.01
HMGA1-205ENST00000447654 GSPT2Q8IYD1 628 aaKnown RBP21.37■■□□□ 1.01
HMGA1-205ENST00000447654 SPATA20Q8TB22 786 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 CPLX3Q8WVH0 158 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 TRPC6Q9Y210 931 aa21.37■■□□□ 1.01
HMGA1-205ENST00000447654 UBN2Q6ZU65 1347 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 KIF28PB7ZC32 967 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 NDUFA10O95299 355 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 HDLBPQ00341 1268 aaKnown RBP21.36■■□□□ 1.01
HMGA1-205ENST00000447654 SCARF1Q14162 830 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 HSP90AA4PQ58FG1 418 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 SLC9C2Q5TAH2 1124 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 MREGQ8N565 214 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 TTLL11Q8NHH1 800 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 CUL5Q93034 780 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 CYFIP2Q96F07 1278 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 CEP126Q9P2H0 1117 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 SLIT2O94813 1529 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 RAB27AP51159 221 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 E2F5Q15329 346 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 MIS18BP1Q6P0N0 1132 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms