RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 COPB1P53618 953 aaKnown RBP10.65□□□□□ -0.7
KLHL3-202ENST00000447439 FILIP1LQ4L180 1135 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 NAALADL2Q58DX5 795 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 C12orf60Q5U649 245 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
KLHL3-202ENST00000447439 PARD6BQ9BYG5 372 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 PCDHA6Q9UN73 950 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 PCDHA8Q9Y5H6 950 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 CCDC194A0A1B0GVG4 234 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
KLHL3-202ENST00000447439 LDHBP07195 334 aaKnown RBP10.65□□□□□ -0.7
KLHL3-202ENST00000447439 KLK7P49862 253 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 GYS2P54840 703 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 UBXN1Q04323 297 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 SLC35F6Q8N357 371 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 PANX2Q96RD6 677 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 NARFQ9UHQ1 456 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 PCDHA4Q9UN74 947 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 A0A1B0GUL6 1792 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 AHDC1Q5TGY3 1603 aaPredicted RBP10.64□□□□□ -0.71
KLHL3-202ENST00000447439 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
KLHL3-202ENST00000447439 TCP11X2Q5H9J9 407 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 CLEC10AQ8IUN9 316 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 RNF216Q9NWF9 866 aaPredicted RBP10.64□□□□□ -0.71
KLHL3-202ENST00000447439 ZRANB2O95218 330 aaKnown RBP eCLIP10.64□□□□□ -0.71
KLHL3-202ENST00000447439 KIF5BP33176 963 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 LETM2Q2VYF4 491 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 TPTE2Q6XPS3 522 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 IRF2BP1Q8IU81 584 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 DISC1Q9NRI5 854 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 ABHD10Q9NUJ1 306 aa10.64□□□□□ -0.71
KLHL3-202ENST00000447439 CCNL1Q9UK58 526 aaPredicted RBP10.64□□□□□ -0.71
KLHL3-202ENST00000447439 TOM1O60784 492 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 BMP15O95972 392 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 TUBB4AP04350 444 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 KRT9P35527 623 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 EIF6P56537 245 aaKnown RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 KIF4BQ2VIQ3 1234 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 ZNF658Q5TYW1 1059 aaPredicted RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 DTHD1Q6ZMT9 781 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 ANKRD2Q9GZV1 360 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 UBA5Q9GZZ9 404 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 SUGCTQ9HAC7 445 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 TMEM260Q9NX78 707 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 RWDD2AQ9UIY3 292 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 STXBP3O00186 592 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 SEMA3EO15041 775 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 TBC1D8O95759 1140 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 RHOXF2BP0C7M4 288 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 SLURP2P0DP57 97 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 GABPB1Q06547 395 aaPredicted RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 SBK1Q52WX2 424 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 CC2D1AQ6P1N0 951 aaPredicted RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 ZNF444Q8N0Y2 327 aaPredicted RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 RHOXF2Q9BQY4 288 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 SRRTQ9BXP5 876 aaKnown RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 DLEC1Q9Y238 1755 aa10.63□□□□□ -0.71
KLHL3-202ENST00000447439 FRMPD2Q68DX3 1309 aaPredicted RBP10.63□□□□□ -0.71
KLHL3-202ENST00000447439 GOLGA6L9A6NEM1 432 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 ENC1O14682 589 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 KIF5CO60282 957 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 CCNT1O60563 726 aaKnown RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 PCP11498 1178 aaKnown RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 UBA7P41226 1012 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 GRM4Q14833 912 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 RSRC2Q7L4I2 434 aaKnown RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 CTAGE1Q96RT6 745 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 NYXQ9GZU5 481 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 ARGLU1Q9NWB6 273 aaPredicted RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 LIMA1Q9UHB6 759 aaKnown RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 EP400Q96L91 3159 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 IRS2Q9Y4H2 1338 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 CASZ1Q86V15 1759 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 TTC26A0AVF1 554 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 B4DLN1 442 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 KLRF2D3W0D1 207 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 RPS6KA4O75676 772 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 FCER1AP12319 257 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 RASA1P20936 1047 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 TXLNAP40222 546 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 BTDP43251 543 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 CCDC178Q5BJE1 867 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 NCAPH2Q6IBW4 605 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 GJA10Q969M2 543 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 PNKPQ96T60 521 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 HDAC6Q9UBN7 1215 aa10.62□□□□□ -0.71
KLHL3-202ENST00000447439 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
KLHL3-202ENST00000447439 GUCA1BQ9UMX6 200 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms