RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SNAP25P60880 206 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 UBXN2AP68543 259 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 MAP2K5Q13163 448 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 GRB14Q14449 540 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 CPXCR1Q8N123 301 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-204ENST00000446876 DCAF4Q8WV16 495 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 ZSCAN10Q96SZ4 725 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-204ENST00000446876 APBA2Q99767 749 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 UNC93B1Q9H1C4 597 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 RAVER2Q9HCJ3 691 aaKnown RBP17.45■□□□□ 0.38
HDAC4-204ENST00000446876 TNKSO95271 1327 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 BRCA2P51587 3418 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 E7EWF7 191 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 HMGCRP04035 888 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 SNRNP48Q6IEG0 339 aaKnown RBP17.44■□□□□ 0.38
HDAC4-204ENST00000446876 RIOX2Q8IUF8 465 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 TTC14Q96N46 770 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 TMEM106CQ9BVX2 250 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 MROH8Q9H579 483 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 SLC38A10Q9HBR0 1119 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 GPCPD1Q9NPB8 672 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
HDAC4-204ENST00000446876 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-204ENST00000446876 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 ZBED4O75132 1171 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 PDHBP11177 359 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 ZKSCAN1P17029 563 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-204ENST00000446876 EN2P19622 333 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-204ENST00000446876 ADORA2AP29274 412 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 SLC16A2P36021 539 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 RGS19P49795 217 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 DGKHQ86XP1 1220 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 NPLOC4Q8TAT6 608 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 UBAC1Q9BSL1 405 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 TEX13BQ9BXU2 312 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 RNF208Q9H0X6 261 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 FLRT1Q9NZU1 646 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 PRR12Q9ULL5 1215 aa17.43■□□□□ 0.38
HDAC4-204ENST00000446876 SLC27A2O14975 620 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 COBLO75128 1261 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 SLC25A27O95847 323 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 XRCC5P13010 732 aaKnown RBP17.42■□□□□ 0.38
HDAC4-204ENST00000446876 TAL1P17542 331 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-204ENST00000446876 NT5C2P49902 561 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 TRDNQ13061 729 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 COL9A3Q14050 684 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-204ENST00000446876 CASC1Q6TDU7 716 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 RALYLQ86SE5 291 aaKnown RBP17.42■□□□□ 0.38
HDAC4-204ENST00000446876 PNMA1Q8ND90 353 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 CHURC1Q8WUH1 139 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
HDAC4-204ENST00000446876 GOLGA8HP0CJ92 632 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 SNHG28P0DPA3 235 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 ZNF543Q08ER8 600 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 SEC23AQ15436 765 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 CCDC178Q5BJE1 867 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 CREB3L3Q68CJ9 461 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 MMP19Q99542 508 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 CPVLQ9H3G5 476 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 ZNF536O15090 1300 aa17.41■□□□□ 0.38
HDAC4-204ENST00000446876 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 STRNO43815 780 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 PLA2G6O60733 806 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 PGK2P07205 417 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 FCER1AP12319 257 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
HDAC4-204ENST00000446876 ANTXR2P58335 489 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
HDAC4-204ENST00000446876 SYDE2Q5VT97 1194 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 DPP9Q86TI2 863 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-204ENST00000446876 SHISA4Q96DD7 197 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 AGBL1Q96MI9 1066 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 HOMER2Q9NSB8 354 aa17.4■□□□□ 0.38
HDAC4-204ENST00000446876 HOXC6P09630 235 aa17.39■□□□□ 0.37
HDAC4-204ENST00000446876 MLLT1Q03111 559 aaPredicted RBP17.39■□□□□ 0.37
HDAC4-204ENST00000446876 CACNB2Q08289 660 aaPredicted RBP17.39■□□□□ 0.37
HDAC4-204ENST00000446876 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
HDAC4-204ENST00000446876 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.39■□□□□ 0.371e-5■■■□□ 18
HDAC4-204ENST00000446876 FRMPD3Q5JV73 1810 aa17.39■□□□□ 0.37
HDAC4-204ENST00000446876 IFIT3O14879 490 aaKnown RBP17.38■□□□□ 0.37
HDAC4-204ENST00000446876 GJB1P08034 283 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 CYP2C19P33261 490 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 COPB2P35606 906 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 OAZ1P54368 228 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 KCTD2Q14681 263 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 MAP3K21Q5TCX8 1036 aa17.38■□□□□ 0.37
HDAC4-204ENST00000446876 TRMT44Q8IYL2 757 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms