RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 BTNL9Q6UXG8 535 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 SMCR8Q8TEV9 937 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-204ENST00000445623 SNX21Q969T3 373 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 PTPN18Q99952 460 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 ASCC2Q9H1I8 757 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-204ENST00000445623 PPP1R9AQ9ULJ8 1098 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
TIMP1-204ENST00000445623 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
TIMP1-204ENST00000445623 CDKL5O76039 1030 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 DSG3P32926 999 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
TIMP1-204ENST00000445623 TAF1CQ15572 869 aaPredicted RBP15.3■□□□□ 0.04
TIMP1-204ENST00000445623 ME3Q16798 604 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
TIMP1-204ENST00000445623 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 STAG2Q8N3U4 1231 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 MB21D1Q8N884 522 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 KIFC2Q96AC6 838 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 ZIC5Q96T25 663 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 SPZ1Q9BXG8 430 aa15.3■□□□□ 0.04
TIMP1-204ENST00000445623 ZBED4O75132 1171 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 SLC16A2P36021 539 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 HERVK_113P62684 666 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 SCRN1Q12765 414 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 ZFYVE28Q9HCC9 887 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 FBXO28Q9NVF7 368 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 RBM27Q9P2N5 1060 aaKnown RBP15.29■□□□□ 0.04
TIMP1-204ENST00000445623 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 PRR12Q9ULL5 1215 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 RLFQ13129 1914 aa15.29■□□□□ 0.04
TIMP1-204ENST00000445623 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 CDC27P30260 824 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 ADD1P35611 737 aaKnown RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 GCLCP48506 637 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 MAP2K1Q02750 393 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 LBX2Q6XYB7 198 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 TRIM22Q8IYM9 498 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 ADGRF4Q8IZF3 695 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 TMX3Q96JJ7 454 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 P2RX7Q99572 595 aaKnown RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
TIMP1-204ENST00000445623 NCOA5Q9HCD5 579 aaKnown RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 SEC63Q9UGP8 760 aaKnown RBP15.28■□□□□ 0.04
TIMP1-204ENST00000445623 A0A0G2JMZ2 1700 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 CA12O43570 354 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 LARGE1O95461 756 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 CYP2C8P10632 490 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 IFNAR1P17181 557 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 TRAF1Q13077 416 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 BECN1Q14457 450 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 SRBD1Q8N5C6 995 aaKnown RBP15.27■□□□□ 0.04
TIMP1-204ENST00000445623 NECAB1Q8N987 351 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 ATG4CQ96DT6 458 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 RRP36Q96EU6 259 aaKnown RBP15.27■□□□□ 0.04
TIMP1-204ENST00000445623 RIOX1Q9H6W3 641 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 VAT1LQ9HCJ6 419 aa15.27■□□□□ 0.04
TIMP1-204ENST00000445623 FAM217BQ9NTX9 383 aaPredicted RBP15.27■□□□□ 0.04
TIMP1-204ENST00000445623 MYH6P13533 1939 aa15.27■□□□□ 0.03
TIMP1-204ENST00000445623 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 VWA5AO00534 786 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 ANP32AP39687 249 aaKnown RBP15.26■□□□□ 0.03
TIMP1-204ENST00000445623 OAZ1P54368 228 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 CDC37Q16543 378 aaPredicted RBP15.26■□□□□ 0.03
TIMP1-204ENST00000445623 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 CCDC82Q8N4S0 544 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 LLPHQ9BRT6 129 aaKnown RBP15.26■□□□□ 0.03
TIMP1-204ENST00000445623 RNF26Q9BY78 433 aaPredicted RBP15.26■□□□□ 0.03
TIMP1-204ENST00000445623 RANBP17Q9H2T7 1088 aaKnown RBP15.26■□□□□ 0.03
TIMP1-204ENST00000445623 CPVLQ9H3G5 476 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 ADAMTS5Q9UNA0 930 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 RABGAP1Q9Y3P9 1069 aa15.26■□□□□ 0.03
TIMP1-204ENST00000445623 COL11A1P12107 1806 aaPredicted RBP15.26■□□□□ 0.03
TIMP1-204ENST00000445623 ZBTB5O15062 677 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 TLR2O60603 784 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
TIMP1-204ENST00000445623 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 CMTR1Q8N1G2 835 aaKnown RBP15.25■□□□□ 0.03
TIMP1-204ENST00000445623 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 SLC26A6Q9BXS9 759 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 SAGE1Q9NXZ1 904 aa15.25■□□□□ 0.03
TIMP1-204ENST00000445623 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.25■□□□□ 0.03
TIMP1-204ENST00000445623 BAZ2BQ9UIF8 2168 aaKnown RBP15.24■□□□□ 0.03
TIMP1-204ENST00000445623 PNMA6FA0A0J9YX94 578 aa15.24■□□□□ 0.03
TIMP1-204ENST00000445623 CYTH3O43739 400 aa15.24■□□□□ 0.03
TIMP1-204ENST00000445623 COPB2P35606 906 aa15.24■□□□□ 0.03
TIMP1-204ENST00000445623 CCNA1P78396 465 aa15.24■□□□□ 0.03
TIMP1-204ENST00000445623 HMGN5P82970 282 aaKnown RBP15.24■□□□□ 0.03
TIMP1-204ENST00000445623 CRHR2Q13324 411 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms