RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 APOBEC3HQ6NTF7 200 aaKnown RBP8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 CCDC191Q8NCU4 936 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 KREMEN2Q8NCW0 462 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 CDCA3Q99618 268 aaPredicted RBP8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 TSC2P49815 1807 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 CENPFP49454 3210 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 OTOGLQ3ZCN5 2332 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 USP17L5A8MUK1 530 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 ATXN7O15265 892 aaPredicted RBP8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 CNMDO75829 334 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 HMOX1P09601 288 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 CSRP2Q16527 193 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 MFSD14BQ5SR56 506 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 DCLK2Q8N568 766 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 FAM89AQ96GI7 184 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 IDI2Q9BXS1 227 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 SYNRGQ9UMZ2 1314 aa8.28□□□□□ -1.08
BRAFP1-201ENST00000445336 LILRB3O75022 631 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 RRP1P56182 461 aaKnown RBP8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 MAP4K1Q92918 833 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 FAM184BQ9ULE4 1060 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 USP18Q9UMW8 372 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 ZFHX4Q86UP3 3567 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 FLNBO75369 2602 aaKnown RBP8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 TBX10O75333 385 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 NPR3P17342 541 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 COPB2P35606 906 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 RBL2Q08999 1139 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 GPM6BQ13491 265 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 KCNA10Q16322 511 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 MROH8Q9H579 483 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.09
BRAFP1-201ENST00000445336 F8W031 263 aaPredicted RBP8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 TREHO43280 583 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 KCNJ4P48050 445 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 CTSWP56202 376 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 MIGA2Q7L4E1 593 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 ZNF605Q86T29 641 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 NECTIN4Q96NY8 510 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 SMG5Q9UPR3 1016 aaKnown RBP8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 CHD9Q3L8U1 2897 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 CNKSR3Q6P9H4 555 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 TMEM184AQ6ZMB5 413 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 DPP9Q86TI2 863 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 ZBTB44Q8NCP5 570 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 USP15Q9Y4E8 981 aaPredicted RBP8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 HCFC2Q9Y5Z7 792 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 R4GN57 208 aa8.26□□□□□ -1.09
BRAFP1-201ENST00000445336 CFAP54Q96N23 3096 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 TRANK1O15050 2925 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 CAPNS1P04632 268 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 ZNF865P0CJ78 1059 aaPredicted RBP8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 WDR5P61964 334 aaKnown RBP8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 Q3C1V9 767 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 IL31Q6EBC2 164 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 BCAS3Q9H6U6 928 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 ZEB2O60315 1214 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 RETP07949 1114 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 MAML3Q96JK9 1138 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
BRAFP1-201ENST00000445336 SRGAP2BP0DMP2 458 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 BACE1P56817 501 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 ZSCAN32Q9NX65 697 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 CXCL10P02778 98 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L2Q6R6M4 530 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 ZNF467Q7Z7K2 595 aaPredicted RBP8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 NEK1Q96PY6 1258 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 KIF16BQ96L93 1317 aa8.24□□□□□ -1.09
BRAFP1-201ENST00000445336 MMP1P03956 469 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 HOXB7P09629 217 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 MB21D1Q8N884 522 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 ZNF513Q8N8E2 541 aaPredicted RBP8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 XAGE3Q8WTP9 111 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 BFSP2Q13515 415 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 PROSER1Q86XN7 944 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 IER2Q9BTL4 223 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 C11orf84Q9BUA3 381 aaPredicted RBP8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 MSRB2Q9Y3D2 182 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 Q9Y3F1 56 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 MROH5Q6ZUA9 1318 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 ADORA2AP29274 412 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 KCNC4Q03721 635 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms