RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 NAPGQ99747 312 aaPredicted RBP21.3■■□□□ 1
PMPCB-204ENST00000444457 PHF20Q9BVI0 1012 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 RBM28Q9NW13 759 aaKnown RBP21.3■■□□□ 1
PMPCB-204ENST00000444457 RGL2O15211 777 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 PLEKHA8P1O95397 391 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 TFRCP02786 760 aaKnown RBP21.3■■□□□ 1
PMPCB-204ENST00000444457 PRR29P0C7W0 189 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 NOA1Q8NC60 698 aaKnown RBP21.3■■□□□ 1
PMPCB-204ENST00000444457 DACH1Q9UI36 760 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 COL24A1Q17RW2 1714 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 KRT2P35908 639 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 TROAPQ12815 778 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 CSRNP2Q9H175 543 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 MAST2Q6P0Q8 1798 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 FAM205CA6NFA0 338 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 USP17L12C9JPN9 530 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 USP17L21D6R901 530 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 CALM1P0DP23 149 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 CALM2P0DP24 149 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 CALM3P0DP25 149 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 SARSP49591 514 aaKnown RBP21.29■■□□□ 1
PMPCB-204ENST00000444457 SMIM5Q71RC9 77 aa21.29■■□□□ 1
PMPCB-204ENST00000444457 TTF2Q9UNY4 1162 aaKnown RBP21.29■■□□□ 1
PMPCB-204ENST00000444457 PDS5AQ29RF7 1337 aaKnown RBP21.28■■□□□ 1
PMPCB-204ENST00000444457 ZC3H4Q9UPT8 1303 aaKnown RBP21.28■■□□□ 1
PMPCB-204ENST00000444457 TRIM75PA6NK02 468 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 ACTN4O43707 911 aaKnown RBP21.28■■□□□ 1
PMPCB-204ENST00000444457 ERLIN2O94905 339 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 RPS8P62241 208 aaKnown RBP21.28■■□□□ 1
PMPCB-204ENST00000444457 MECOMQ03112 1051 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 KAT2BQ92831 832 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.28■■□□□ 1
PMPCB-204ENST00000444457 hCG_1642624A0A1W2PR95 340 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 DDAH1O94760 285 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 RBL2Q08999 1139 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 USP49Q70CQ1 688 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 MED15Q96RN5 788 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 NYXQ9GZU5 481 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 MYO1AQ9UBC5 1043 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 HPCAL4Q9UM19 191 aa21.28■■□□□ 1
PMPCB-204ENST00000444457 V9GY48 417 aaPredicted RBP21.28■■□□□ 1
PMPCB-204ENST00000444457 FECHP22830 423 aa21.27■■□□□ 1
PMPCB-204ENST00000444457 AMPD2Q01433 879 aa21.27■■□□□ 1
PMPCB-204ENST00000444457 FAM98CQ17RN3 349 aaKnown RBP21.27■■□□□ 1
PMPCB-204ENST00000444457 EARS2Q5JPH6 523 aaKnown RBP21.27■■□□□ 1
PMPCB-204ENST00000444457 KANK3Q6NY19 840 aa21.27■■□□□ 1
PMPCB-204ENST00000444457 TRMT44Q8IYL2 757 aaKnown RBP21.27■■□□□ 1
PMPCB-204ENST00000444457 GRAMD1CQ8IYS0 662 aa21.27■■□□□ 1
PMPCB-204ENST00000444457 SAMSN1Q9NSI8 373 aaKnown RBP21.27■■□□□ 1
PMPCB-204ENST00000444457 KIAA1551Q9HCM1 1747 aa21.27■■□□□ 1
PMPCB-204ENST00000444457 HSPA1LP34931 641 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 MORC3Q14149 939 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 TMTC3Q6ZXV5 915 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 APTXQ7Z2E3 356 aaKnown RBP21.26■□□□□ 0.99
PMPCB-204ENST00000444457 IGSF22Q8N9C0 903 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 TRIML1Q8N9V2 468 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 NLRP3Q96P20 1036 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 CXorf56Q9H5V9 222 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 AATFQ9NY61 560 aaKnown RBP eCLIP21.26■□□□□ 0.99
PMPCB-204ENST00000444457 ORC4O43929 436 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 MFAP3LO75121 409 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 PBX1P40424 430 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 EVX2Q03828 476 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 PPFIBP1Q86W92 1011 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 DCP1AQ9NPI6 582 aaPredicted RBP21.26■□□□□ 0.99
PMPCB-204ENST00000444457 NARFQ9UHQ1 456 aa21.26■□□□□ 0.99
PMPCB-204ENST00000444457 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
PMPCB-204ENST00000444457 CRNKL1Q9BZJ0 848 aaKnown RBP21.25■□□□□ 0.99
PMPCB-204ENST00000444457 TFCP2L1Q9NZI6 479 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 CNTNAP5Q8WYK1 1306 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 TEX33O43247 280 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 ZNF827Q17R98 1081 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 MAP9Q49MG5 647 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 CCDC148Q8NFR7 591 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 ANKRD2Q9GZV1 360 aa21.25■□□□□ 0.99
PMPCB-204ENST00000444457 SRP68Q9UHB9 627 aaKnown RBP21.25■□□□□ 0.99
PMPCB-204ENST00000444457 MCM3P25205 808 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 PRDX5P30044 214 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 NBPF5PQ86XG9 351 aaPredicted RBP21.24■□□□□ 0.99
PMPCB-204ENST00000444457 SPATA20Q8TB22 786 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 SETDB2Q96T68 719 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 MYO6Q9UM54 1294 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 BAZ2BQ9UIF8 2168 aaKnown RBP21.24■□□□□ 0.99
PMPCB-204ENST00000444457 CCDC172P0C7W6 258 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 USP14P54578 494 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 NPY5RQ15761 445 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 CT47A1Q5JQC4 288 aaPredicted RBP21.24■□□□□ 0.99
PMPCB-204ENST00000444457 TNFRSF25Q93038 417 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 ATP8A2Q9NTI2 1148 aa21.24■□□□□ 0.99
PMPCB-204ENST00000444457 BMP15O95972 392 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 ERCC5P28715 1186 aaPredicted RBP21.23■□□□□ 0.99
PMPCB-204ENST00000444457 COG1Q8WTW3 980 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 CCDC51Q96ER9 411 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 A0A087X0B3 334 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 WNT7AO00755 349 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 NMT2O60551 498 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 HNRNPH1P31943 449 aaKnown RBP21.23■□□□□ 0.99
PMPCB-204ENST00000444457 ARHGAP25P42331 645 aa21.23■□□□□ 0.99
PMPCB-204ENST00000444457 PLCD1P51178 756 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms