RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 FAM184BQ9ULE4 1060 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 SEMA3EO15041 775 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 GH2P01242 217 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 PFKMP08237 780 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 PHKA1P46020 1223 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 MECOMQ03112 1051 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 DGLUCYQ7Z3D6 616 aa17.67■□□□□ 0.42
SYNCRIP-203ENST00000444272 ACACBO00763 2458 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 PTPRSQ13332 1948 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 DUSP11O75319 330 aaKnown RBP17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 ACTN1P12814 892 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 EP400NLQ6ZTU2 488 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 TEX11Q8IYF3 940 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 ZNF384Q8TF68 577 aa17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 DHX36Q9H2U1 1008 aaKnown RBP17.66■□□□□ 0.42
SYNCRIP-203ENST00000444272 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 AGBL1Q96MI9 1066 aa17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 KIAA1683Q9H0B3 1180 aa17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 TRPV6Q9H1D0 765 aa17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 SPC25Q9HBM1 224 aa17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 ZHX1Q9UKY1 873 aaPredicted RBP17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 SIP14410 1827 aa17.65■□□□□ 0.42
SYNCRIP-203ENST00000444272 ZNF292O60281 2723 aa17.64■□□□□ 0.42
SYNCRIP-203ENST00000444272 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 COG2Q14746 738 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 ZNF792Q3KQV3 632 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 SPTY2D1Q68D10 685 aaPredicted RBP17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 ADSSL1Q8N142 457 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 SLC43A3Q8NBI5 491 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 MMP19Q99542 508 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 HOXC10Q9NYD6 342 aa17.64■□□□□ 0.41
SYNCRIP-203ENST00000444272 ADCY6O43306 1168 aa17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 B4GALT4O60513 344 aa17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 KDM4AO75164 1064 aa17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 FOXP4Q8IVH2 680 aaPredicted RBP17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 RMDN1Q96DB5 314 aa17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 POP1Q99575 1024 aaKnown RBP17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 DIS3Q9Y2L1 958 aaKnown RBP17.63■□□□□ 0.41
SYNCRIP-203ENST00000444272 AVPR2P30518 371 aa17.62■□□□□ 0.41
SYNCRIP-203ENST00000444272 NBL1P41271 181 aa17.62■□□□□ 0.41
SYNCRIP-203ENST00000444272 RAB3GAP1Q15042 981 aa17.62■□□□□ 0.41
SYNCRIP-203ENST00000444272 ATP2B3Q16720 1220 aa17.62■□□□□ 0.41
SYNCRIP-203ENST00000444272 COL11A1P12107 1806 aaPredicted RBP17.62■□□□□ 0.41
SYNCRIP-203ENST00000444272 GJA9P57773 515 aa17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 ITGA7Q13683 1181 aa17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 RASGRF1Q13972 1273 aa17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 PABPC5Q96DU9 382 aaKnown RBP17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 UPF3AQ9H1J1 476 aaKnown RBP17.61■□□□□ 0.41
SYNCRIP-203ENST00000444272 EYA2O00167 538 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 CXCL17Q6UXB2 119 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 TMCO2Q7Z6W1 182 aaPredicted RBP17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 MAPKAPK5Q8IW41 473 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 MB21D1Q8N884 522 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 TGS1Q96RS0 853 aaKnown RBP17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 PALD1Q9ULE6 856 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
SYNCRIP-203ENST00000444272 SNAI1O95863 264 aaPredicted RBP17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 LDHCP07864 332 aa17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 ERVK-21P61565 698 aa17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 ZXDAP98168 799 aa17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 BEX3Q00994 111 aa17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 CCDC102BQ68D86 513 aa17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 NKD2Q969F2 451 aaPredicted RBP17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
SYNCRIP-203ENST00000444272 GRIN2DO15399 1336 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 CTAGE5O15320 804 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 GSTO1P78417 241 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 SMAD2Q15796 467 aaKnown RBP17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 NSUN4Q96CB9 384 aaKnown RBP17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 ZBED2Q9BTP6 218 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 SRCIN1Q9C0H9 1055 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 FOCADQ5VW36 1801 aa17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 MAP1BP46821 2468 aaKnown RBP17.58■□□□□ 0.4
SYNCRIP-203ENST00000444272 FLT1P17948 1338 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 PDS5AQ29RF7 1337 aaKnown RBP17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 APAF1O14727 1248 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 SLC25A27O95847 323 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 ADORA1P30542 326 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 CLUL1Q15846 466 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 ST3GAL2Q16842 350 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 ATG4CQ96DT6 458 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 FTOQ9C0B1 505 aaKnown RBP eCLIP17.57■□□□□ 0.44e-8■■■■□ 22.7
SYNCRIP-203ENST00000444272 CLDND1Q9NY35 253 aa17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 RALYQ9UKM9 306 aaKnown RBP17.57■□□□□ 0.4
SYNCRIP-203ENST00000444272 CYP2C9P11712 490 aa17.56■□□□□ 0.4
SYNCRIP-203ENST00000444272 DSG3P32926 999 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms