RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 FAM227BQ96M60 508 aa17.13■□□□□ 0.33
PTPRN-206ENST00000442029 TOMM22Q9NS69 142 aa17.13■□□□□ 0.33
PTPRN-206ENST00000442029 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
PTPRN-206ENST00000442029 STX8Q9UNK0 236 aa17.13■□□□□ 0.33
PTPRN-206ENST00000442029 PFASO15067 1338 aa17.13■□□□□ 0.33
PTPRN-206ENST00000442029 A0A0D9SFI3 127 aa17.12■□□□□ 0.33
PTPRN-206ENST00000442029 SEPT4O43236 478 aa17.12■□□□□ 0.33
PTPRN-206ENST00000442029 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
PTPRN-206ENST00000442029 PGK2P07205 417 aa17.12■□□□□ 0.33
PTPRN-206ENST00000442029 ARRDC4Q8NCT1 418 aa17.12■□□□□ 0.33
PTPRN-206ENST00000442029 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
PTPRN-206ENST00000442029 SENP6Q9GZR1 1112 aaPredicted RBP17.12■□□□□ 0.33
PTPRN-206ENST00000442029 KBTBD13C9JR72 458 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 DNM1LO00429 736 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 FOXP2O15409 715 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 COL6A1P12109 1028 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 SLC1A4P43007 532 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
PTPRN-206ENST00000442029 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
PTPRN-206ENST00000442029 ALX1Q15699 326 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 ANO1Q5XXA6 986 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 ANAPC4Q9UJX5 808 aa17.11■□□□□ 0.33
PTPRN-206ENST00000442029 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
PTPRN-206ENST00000442029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTPRN-206ENST00000442029 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 IGHA2P01877 340 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 IGHDP01880 384 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 FDX1P10109 184 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 SYN1P17600 705 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 STAT2P52630 851 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 NUCB1Q02818 461 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
PTPRN-206ENST00000442029 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 FAM160B2Q86V87 743 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 CHURC1Q8WUH1 139 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 TINF2Q9BSI4 451 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 SLC38A10Q9HBR0 1119 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 RAVER2Q9HCJ3 691 aaKnown RBP17.1■□□□□ 0.33
PTPRN-206ENST00000442029 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 NRBP1Q9UHY1 535 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 CCDC171Q6TFL3 1326 aa17.1■□□□□ 0.33
PTPRN-206ENST00000442029 MYH6P13533 1939 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 A0A1W2PPC1 479 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 FGAP02671 866 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 HSPD1P10809 573 aaKnown RBP17.09■□□□□ 0.33
PTPRN-206ENST00000442029 OAZ1P54368 228 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 ZNF792Q3KQV3 632 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 GJC2Q5T442 439 aaPredicted RBP17.09■□□□□ 0.33
PTPRN-206ENST00000442029 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 GMCL1Q96IK5 515 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 FBXO40Q9UH90 709 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
PTPRN-206ENST00000442029 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
PTPRN-206ENST00000442029 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 ORC4O43929 436 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 RARBP10826 455 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 SDSP20132 328 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 MCCP23508 829 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 LRRC26Q2I0M4 334 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
PTPRN-206ENST00000442029 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
PTPRN-206ENST00000442029 HIP1O00291 1037 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 NMT2O60551 498 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 ATN1P54259 1190 aaPredicted RBP17.07■□□□□ 0.32
PTPRN-206ENST00000442029 HAND2P61296 217 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 MSL3Q8N5Y2 521 aaKnown RBP17.07■□□□□ 0.32
PTPRN-206ENST00000442029 CHST13Q8NET6 341 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
PTPRN-206ENST00000442029 AKR1A1P14550 325 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 KCTD1Q719H9 257 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 XPNPEP3Q9NQH7 507 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 PRKAG2Q9UGJ0 569 aa17.06■□□□□ 0.32
PTPRN-206ENST00000442029 SYNGAP1Q96PV0 1343 aa17.05■□□□□ 0.32
PTPRN-206ENST00000442029 FGRP09769 529 aa17.05■□□□□ 0.32
PTPRN-206ENST00000442029 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
PTPRN-206ENST00000442029 MAGEA10P43363 369 aaPredicted RBP17.05■□□□□ 0.32
PTPRN-206ENST00000442029 CWC27Q6UX04 472 aaKnown RBP17.05■□□□□ 0.32
PTPRN-206ENST00000442029 RNF180Q86T96 592 aa17.05■□□□□ 0.32
PTPRN-206ENST00000442029 DCAF4Q8WV16 495 aa17.05■□□□□ 0.32
PTPRN-206ENST00000442029 GDF15Q99988 308 aa17.05■□□□□ 0.32
PTPRN-206ENST00000442029 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
PTPRN-206ENST00000442029 ACAD9Q9H845 621 aa17.05■□□□□ 0.32
PTPRN-206ENST00000442029 PLA2G6O60733 806 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
PTPRN-206ENST00000442029 BMP8BP34820 402 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 RTP1P59025 263 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 LRRC41Q15345 812 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms