RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 CCDC70Q6NSX1 233 aa11.74□□□□□ -0.53
BRPF3-204ENST00000441730 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
BRPF3-204ENST00000441730 PARD3BQ8TEW8 1205 aa11.74□□□□□ -0.53
BRPF3-204ENST00000441730 SMARCE1Q969G3 411 aa11.74□□□□□ -0.53
BRPF3-204ENST00000441730 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
BRPF3-204ENST00000441730 ITM2BQ9Y287 266 aa11.74□□□□□ -0.53
BRPF3-204ENST00000441730 COL1A1P02452 1464 aaPredicted RBP11.74□□□□□ -0.53
BRPF3-204ENST00000441730 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 ANKRD31Q8N7Z5 1873 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
BRPF3-204ENST00000441730 MCM8Q9UJA3 840 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 VDRP11473 427 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 SNX1Q13596 522 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 ZFPM1Q8IX07 1006 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
BRPF3-204ENST00000441730 NACA2Q9H009 215 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
BRPF3-204ENST00000441730 COPB2P35606 906 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 FOSBP53539 338 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 RAB3GAP1Q15042 981 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 IMMTQ16891 758 aaKnown RBP11.73□□□□□ -0.53
BRPF3-204ENST00000441730 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 SYNE3Q6ZMZ3 975 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 TADA2BQ86TJ2 420 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 TTC30BQ8N4P2 665 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 PSD3Q9NYI0 1048 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 SPATA7Q9P0W8 599 aa11.73□□□□□ -0.53
BRPF3-204ENST00000441730 ACTN2P35609 894 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 TMED1Q13445 227 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 LRRC31Q6UY01 552 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 GTF3C6Q969F1 213 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 RTFDC1Q9BY42 306 aaPredicted RBP11.72□□□□□ -0.53
BRPF3-204ENST00000441730 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 B4E1Z4 1266 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 F8VZ95 297 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 RTN2O75298 545 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
BRPF3-204ENST00000441730 ADCK5Q3MIX3 580 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
BRPF3-204ENST00000441730 RNF20Q5VTR2 975 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 CREB3L3Q68CJ9 461 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 CDC42EP5Q6NZY7 148 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 TRPM4Q8TD43 1214 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 MYOZ2Q9NPC6 264 aa11.72□□□□□ -0.53
BRPF3-204ENST00000441730 A0A1B0GUA9 196 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 RXRAP19793 462 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.53
BRPF3-204ENST00000441730 ZBED6P86452 979 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
BRPF3-204ENST00000441730 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 PCNTO95613 3336 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.53
BRPF3-204ENST00000441730 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 DDIT3P35638 169 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 CDR1P51861 262 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 MCCD1P59942 119 aaPredicted RBP11.71□□□□□ -0.53
BRPF3-204ENST00000441730 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
BRPF3-204ENST00000441730 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 TMEM98Q9Y2Y6 226 aa11.71□□□□□ -0.53
BRPF3-204ENST00000441730 SLC27A2O14975 620 aa11.71□□□□□ -0.54
BRPF3-204ENST00000441730 CYP21A2P08686 494 aa11.71□□□□□ -0.54
BRPF3-204ENST00000441730 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 CPLX2Q6PUV4 134 aaKnown RBP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 EZH1Q92800 747 aaPredicted RBP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 DHRS1Q96LJ7 313 aa11.71□□□□□ -0.54
BRPF3-204ENST00000441730 LSG1Q9H089 658 aaKnown RBP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.54
BRPF3-204ENST00000441730 GGA3Q9NZ52 723 aa11.71□□□□□ -0.54
BRPF3-204ENST00000441730 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.54
BRPF3-204ENST00000441730 STX8Q9UNK0 236 aa11.71□□□□□ -0.54
BRPF3-204ENST00000441730 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 WNT10BO00744 389 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 TPPPO94811 219 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 DEUP1Q05D60 604 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 CCDC112Q8NEF3 446 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 SNX21Q969T3 373 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 KRT38O76015 456 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 KCNA2P16389 499 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 PLCD1P51178 756 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 MRPL12P52815 198 aaKnown RBP11.7□□□□□ -0.54
BRPF3-204ENST00000441730 FBXO38Q6PIJ6 1188 aa11.7□□□□□ -0.54
BRPF3-204ENST00000441730 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms