RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 TJAP1Q5JTD0 557 aa24.78■■□□□ 1.56
TRIM39-210ENST00000440271 PANK1Q8TE04 598 aa24.78■■□□□ 1.56
TRIM39-210ENST00000440271 TIFAQ96CG3 184 aa24.78■■□□□ 1.56
TRIM39-210ENST00000440271 DDRGK1Q96HY6 314 aa24.78■■□□□ 1.56
TRIM39-210ENST00000440271 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.78■■□□□ 1.56
TRIM39-210ENST00000440271 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.78■■□□□ 1.56
TRIM39-210ENST00000440271 TBX21Q9UL17 535 aa24.78■■□□□ 1.56
TRIM39-210ENST00000440271 BAZ2AQ9UIF9 1905 aaKnown RBP24.78■■□□□ 1.56
TRIM39-210ENST00000440271 CHGBP05060 677 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 MFSD5Q6N075 450 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 CTR9Q6PD62 1173 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 MAMDC4Q6UXC1 1216 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 DDX11Q96FC9 970 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.77■■□□□ 1.56
TRIM39-210ENST00000440271 TEX13BQ9BXU2 312 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 ZHX1Q9UKY1 873 aaPredicted RBP24.77■■□□□ 1.56
TRIM39-210ENST00000440271 SLC4A4Q9Y6R1 1079 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 SYNGAP1Q96PV0 1343 aa24.77■■□□□ 1.56
TRIM39-210ENST00000440271 MYADML2A6NDP7 307 aa24.76■■□□□ 1.55
TRIM39-210ENST00000440271 DUSP11O75319 330 aaKnown RBP24.76■■□□□ 1.55
TRIM39-210ENST00000440271 SNRNP48Q6IEG0 339 aaKnown RBP24.76■■□□□ 1.55
TRIM39-210ENST00000440271 C16orf59Q7L2K0 433 aa24.76■■□□□ 1.55
TRIM39-210ENST00000440271 NUP88Q99567 741 aaPredicted RBP24.76■■□□□ 1.55
TRIM39-210ENST00000440271 SLF1Q9BQI6 1058 aa24.76■■□□□ 1.55
TRIM39-210ENST00000440271 RIPK3Q9Y572 518 aa24.76■■□□□ 1.55
TRIM39-210ENST00000440271 DNAJC25-GNG10A0A024R161 153 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 ATP5JP18859 108 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 CDK7P50613 346 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 UBE3CQ15386 1083 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 RPAP2Q8IXW5 612 aaPredicted RBP24.75■■□□□ 1.55
TRIM39-210ENST00000440271 GLT1D1Q96MS3 346 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 ELP1O95163 1332 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
TRIM39-210ENST00000440271 CST5P28325 142 aaPredicted RBP24.74■■□□□ 1.55
TRIM39-210ENST00000440271 IRX5P78411 483 aaPredicted RBP24.74■■□□□ 1.55
TRIM39-210ENST00000440271 HAUS7Q99871 368 aa24.74■■□□□ 1.55
TRIM39-210ENST00000440271 MROH7Q68CQ1 1323 aa24.74■■□□□ 1.55
TRIM39-210ENST00000440271 PPIGQ13427 754 aaKnown RBP eCLIP24.73■■□□□ 1.55
TRIM39-210ENST00000440271 ACVR2BQ13705 512 aa24.73■■□□□ 1.55
TRIM39-210ENST00000440271 TMEM240Q5SV17 173 aa24.73■■□□□ 1.55
TRIM39-210ENST00000440271 CCDC174Q6PII3 467 aa24.73■■□□□ 1.55
TRIM39-210ENST00000440271 ZNF467Q7Z7K2 595 aaPredicted RBP24.73■■□□□ 1.55
TRIM39-210ENST00000440271 SIRT2Q8IXJ6 389 aa24.73■■□□□ 1.55
TRIM39-210ENST00000440271 PRPF38AQ8NAV1 312 aaKnown RBP24.73■■□□□ 1.55
TRIM39-210ENST00000440271 PCSK9Q8NBP7 692 aaKnown RBP24.73■■□□□ 1.55
TRIM39-210ENST00000440271 VTI1AQ96AJ9 217 aa24.73■■□□□ 1.55
TRIM39-210ENST00000440271 PBX4Q9BYU1 374 aa24.73■■□□□ 1.55
TRIM39-210ENST00000440271 GRXCR1A8MXD5 290 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 F5H6K3 240 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 TNFRSF10AO00220 468 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 RAB11FIP3O75154 756 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 HMMRO75330 724 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 ASGR1P07306 291 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 C6orf222P0C671 652 aaPredicted RBP24.72■■□□□ 1.55
TRIM39-210ENST00000440271 PBX2P40425 430 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 SLC4A3P48751 1232 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 KLRC3Q07444 240 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 RASIP1Q5U651 963 aa24.72■■□□□ 1.55
TRIM39-210ENST00000440271 PUS7LQ9H0K6 701 aaKnown RBP24.72■■□□□ 1.55
TRIM39-210ENST00000440271 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.72■■□□□ 1.55
TRIM39-210ENST00000440271 ATP2A1O14983 1001 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 ADCY6O43306 1168 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 CSF2RAP15509 400 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 CCDC129Q6ZRS4 1044 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 CPXCR1Q8N123 301 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 TMEM199Q8N511 208 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 PPM1EQ8WY54 764 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 GAS2L1Q99501 681 aaPredicted RBP24.71■■□□□ 1.55
TRIM39-210ENST00000440271 SPC25Q9HBM1 224 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 NYAP2Q9P242 653 aa24.71■■□□□ 1.55
TRIM39-210ENST00000440271 ARPP21Q9UBL0 812 aaPredicted RBP24.71■■□□□ 1.55
TRIM39-210ENST00000440271 ARVCFO00192 962 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 ZBED4O75132 1171 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 NDUFB10O96000 172 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 RASA1P20936 1047 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 GJA9P57773 515 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 CCDC144BQ3MJ40 725 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 UPF3AQ9H1J1 476 aaKnown RBP24.7■■□□□ 1.54
TRIM39-210ENST00000440271 ABHD16BQ9H3Z7 469 aa24.7■■□□□ 1.54
TRIM39-210ENST00000440271 A0A0U1RQG5 324 aaPredicted RBP24.69■■□□□ 1.54
TRIM39-210ENST00000440271 ACRP10323 421 aa24.69■■□□□ 1.54
TRIM39-210ENST00000440271 GNASQ5JWF2 1037 aa24.69■■□□□ 1.54
TRIM39-210ENST00000440271 ZSCAN25Q6NSZ9 544 aa24.69■■□□□ 1.54
TRIM39-210ENST00000440271 ZNF365Q70YC5 407 aa24.69■■□□□ 1.54
TRIM39-210ENST00000440271 PRDM12Q9H4Q4 367 aa24.69■■□□□ 1.54
TRIM39-210ENST00000440271 RAVER2Q9HCJ3 691 aaKnown RBP24.69■■□□□ 1.54
TRIM39-210ENST00000440271 CTDP1Q9Y5B0 961 aaPredicted RBP24.69■■□□□ 1.54
TRIM39-210ENST00000440271 HNRNPUQ00839 825 aaKnown RBP eCLIP24.68■■□□□ 1.54
TRIM39-210ENST00000440271 SBK1Q52WX2 424 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 AKNAD1Q5T1N1 836 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.68■■□□□ 1.54
TRIM39-210ENST00000440271 FAM126BQ8IXS8 530 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 STK11IPQ8N1F8 1099 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 ANKRD35Q8N283 1001 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 ATXN2LQ8WWM7 1075 aaKnown RBP24.68■■□□□ 1.54
TRIM39-210ENST00000440271 FGD4Q96M96 766 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 PPP1R12CQ9BZL4 782 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 MKNK2Q9HBH9 465 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 CLIP2Q9UDT6 1046 aa24.68■■□□□ 1.54
TRIM39-210ENST00000440271 PSRC1Q6PGN9 363 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms