RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 PLIN2Q99541 437 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 LZTS2Q9BRK4 669 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 TRIM7Q9C029 511 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 C19orf44Q9H6X5 657 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 ZCCHC17Q9NP64 241 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 GPHNQ9NQX3 736 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 ADGRB2O60241 1585 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 HECW2Q9P2P5 1572 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 VIRMAQ69YN4 1812 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 A0A1B0GUA9 196 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 NDUFAB1O14561 156 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 DKC1O60832 514 aaKnown RBP eCLIP7.04□□□□□ -1.28
BDNF-211ENST00000439476 ATP2C2O75185 946 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 A1BGP04217 495 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 CTDSPL2Q05D32 466 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ARMCX5Q6P1M9 558 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 CPLX4Q7Z7G2 160 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 CCDC84Q86UT8 332 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 C17orf50Q8WW18 174 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ARMT1Q9H993 441 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 GJB4Q9NTQ9 266 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 TMOD4Q9NZQ9 345 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 STX8Q9UNK0 236 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 USH1CQ9Y6N9 552 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 V9GY48 417 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 SH3TC1Q8TE82 1336 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 COL3A1P02461 1466 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 LMTK2Q8IWU2 1503 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 MYOM1P52179 1685 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 FRMD3A2A2Y4 597 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ADGRB1O14514 1584 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 PTPRMP28827 1452 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SPATA1Q5VX52 437 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 E4F1Q66K89 784 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 SLC35F6Q8N357 371 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SMARCC2Q8TAQ2 1214 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 FAM71BQ8TC56 605 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SALL3Q9BXA9 1300 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 USP42Q9H9J4 1324 aaKnown RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 ALKQ9UM73 1620 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ITM2BQ9Y287 266 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SAR1BQ9Y6B6 198 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ZNF532Q9HCE3 1301 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 PPFIA1Q13136 1202 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 MTMR3Q13615 1198 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 TSGA10IPQ3SY00 556 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 CC2D1AQ6P1N0 951 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 DAAM2Q86T65 1068 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 TMEM110Q86TL2 294 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 GABPB2Q8TAK5 448 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 N4BP2L2Q92802 583 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 SH2D4AQ9H788 454 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SSX2IPQ9Y2D8 614 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 C6orf229H3BNL8 230 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 IRS4O14654 1257 aaPredicted RBP7.04□□□□□ -1.28
BDNF-211ENST00000439476 INPP5BP32019 993 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SNX1Q13596 522 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SLC4A8Q2Y0W8 1093 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 TTC38Q5R3I4 469 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SND1Q7KZF4 910 aaKnown RBP eCLIP7.04□□□□□ -1.28
BDNF-211ENST00000439476 MAIP1Q8WWC4 291 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 BPIFA3Q9BQP9 254 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 EPC1Q9H2F5 836 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 BLZF1Q9H2G9 400 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 NKIRAS1Q9NYS0 192 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 ADAM21Q9UKJ8 722 aa7.04□□□□□ -1.28
BDNF-211ENST00000439476 SPDYE3A6NKU9 549 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 CASP14P31944 242 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 SNX16P57768 344 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 SEL1L2Q5TEA6 688 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 IFT20Q8IY31 132 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 OR8K1Q8NGG5 319 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 MIEF2Q96C03 454 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 AIFM3Q96NN9 605 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 MTRQ99707 1265 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 MYO3AQ8NEV4 1616 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 hCG_1642624A0A1W2PR95 340 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 M0R2C6 588 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 PYGLP06737 847 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 ITGA6P23229 1130 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
BDNF-211ENST00000439476 CD151P48509 253 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 ZBTB16Q05516 673 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 IRF5Q13568 498 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 PARP10Q53GL7 1025 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 EPHA10Q5JZY3 1008 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 HAUS3Q68CZ6 603 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 NYAP1Q6ZVC0 841 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 SV2BQ7L1I2 683 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 CMTR1Q8N1G2 835 aaKnown RBP7.03□□□□□ -1.28
BDNF-211ENST00000439476 ENOX1Q8TC92 643 aaKnown RBP7.03□□□□□ -1.28
BDNF-211ENST00000439476 CABLES1Q8TDN4 633 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 NELFBQ8WX92 580 aa7.03□□□□□ -1.28
BDNF-211ENST00000439476 KIFAP3Q92845 792 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms