RNA–Protein interactions for RNA: ENST00000438823.1

DUSP28-203, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-203ENST00000438823 FRMPD3Q5JV73 1810 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 PLXNA1Q9UIW2 1896 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 ZNF213O14771 459 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 ZBED4O75132 1171 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 STAT2P52630 851 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 FAM160B2Q86V87 743 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 NPLOC4Q8TAT6 608 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 HTATIP2Q9BUP3 242 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 NBPF3Q9H094 633 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 SLC38A10Q9HBR0 1119 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 TOMM22Q9NS69 142 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 CTNNA3Q9UI47 895 aa23.33■■□□□ 1.33
DUSP28-203ENST00000438823 SLC1A4P43007 532 aa23.32■■□□□ 1.32
DUSP28-203ENST00000438823 HAND2P61296 217 aa23.32■■□□□ 1.32
DUSP28-203ENST00000438823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.32■■□□□ 1.32
DUSP28-203ENST00000438823 CHURC1Q8WUH1 139 aa23.32■■□□□ 1.32
DUSP28-203ENST00000438823 RUFY2Q8WXA3 655 aa23.32■■□□□ 1.32
DUSP28-203ENST00000438823 FLRT1Q9NZU1 646 aa23.32■■□□□ 1.32
DUSP28-203ENST00000438823 OGDHLQ9ULD0 1010 aa23.32■■□□□ 1.32
DUSP28-203ENST00000438823 NMT2O60551 498 aa23.31■■□□□ 1.32
DUSP28-203ENST00000438823 RRP12Q5JTH9 1297 aaKnown RBP23.31■■□□□ 1.32
DUSP28-203ENST00000438823 TBC1D10CQ8IV04 446 aa23.31■■□□□ 1.32
DUSP28-203ENST00000438823 ESR2Q92731 530 aa23.31■■□□□ 1.32
DUSP28-203ENST00000438823 KIFC2Q96AC6 838 aa23.31■■□□□ 1.32
DUSP28-203ENST00000438823 TTC14Q96N46 770 aa23.31■■□□□ 1.32
DUSP28-203ENST00000438823 MMP19Q99542 508 aa23.31■■□□□ 1.32
DUSP28-203ENST00000438823 DIS3Q9Y2L1 958 aaKnown RBP23.31■■□□□ 1.32
DUSP28-203ENST00000438823 CTDP1Q9Y5B0 961 aaPredicted RBP23.31■■□□□ 1.32
DUSP28-203ENST00000438823 MSCO60682 206 aa23.3■■□□□ 1.32
DUSP28-203ENST00000438823 COBLO75128 1261 aa23.3■■□□□ 1.32
DUSP28-203ENST00000438823 TOP1P11387 765 aaKnown RBP23.3■■□□□ 1.32
DUSP28-203ENST00000438823 KCTD2Q14681 263 aa23.3■■□□□ 1.32
DUSP28-203ENST00000438823 IMMTQ16891 758 aaKnown RBP23.3■■□□□ 1.32
DUSP28-203ENST00000438823 SNRNP48Q6IEG0 339 aaKnown RBP23.3■■□□□ 1.32
DUSP28-203ENST00000438823 DCAF4Q8WV16 495 aa23.3■■□□□ 1.32
DUSP28-203ENST00000438823 RCSD1Q6JBY9 416 aa23.29■■□□□ 1.32
DUSP28-203ENST00000438823 TMEM232C9JQI7 657 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 MCCP23508 829 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 CCND3P30281 292 aaPredicted RBP23.28■■□□□ 1.32
DUSP28-203ENST00000438823 CCDC178Q5BJE1 867 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 NECAB2Q7Z6G3 386 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 MAML3Q96JK9 1138 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 FBXO40Q9UH90 709 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 NRBP1Q9UHY1 535 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 NEDD4P46934 1319 aa23.28■■□□□ 1.32
DUSP28-203ENST00000438823 CYBAP13498 195 aa23.27■■□□□ 1.32
DUSP28-203ENST00000438823 CHMLP26374 656 aa23.27■■□□□ 1.32
DUSP28-203ENST00000438823 LHX8Q68G74 356 aa23.27■■□□□ 1.32
DUSP28-203ENST00000438823 CENPQQ7L2Z9 268 aaPredicted RBP23.27■■□□□ 1.32
DUSP28-203ENST00000438823 CHST13Q8NET6 341 aa23.27■■□□□ 1.32
DUSP28-203ENST00000438823 TMEM47Q9BQJ4 181 aa23.27■■□□□ 1.32
DUSP28-203ENST00000438823 CYP2C19P33261 490 aa23.26■■□□□ 1.31
DUSP28-203ENST00000438823 IKQ13123 557 aaPredicted RBP23.26■■□□□ 1.31
DUSP28-203ENST00000438823 IQCA1Q86XH1 822 aa23.26■■□□□ 1.31
DUSP28-203ENST00000438823 MSL3Q8N5Y2 521 aaKnown RBP23.26■■□□□ 1.31
DUSP28-203ENST00000438823 IL25Q9H293 177 aa23.26■■□□□ 1.31
DUSP28-203ENST00000438823 CNNM2Q9H8M5 875 aa23.26■■□□□ 1.31
DUSP28-203ENST00000438823 DDX20Q9UHI6 824 aaKnown RBP23.26■■□□□ 1.31
DUSP28-203ENST00000438823 ISY1Q9ULR0 285 aaKnown RBP23.26■■□□□ 1.31
DUSP28-203ENST00000438823 RIPK3Q9Y572 518 aa23.26■■□□□ 1.31
DUSP28-203ENST00000438823 ZNF792Q3KQV3 632 aa23.25■■□□□ 1.31
DUSP28-203ENST00000438823 DGKHQ86XP1 1220 aa23.25■■□□□ 1.31
DUSP28-203ENST00000438823 CPXCR1Q8N123 301 aa23.25■■□□□ 1.31
DUSP28-203ENST00000438823 PAWRQ96IZ0 340 aaKnown RBP23.25■■□□□ 1.31
DUSP28-203ENST00000438823 KRT23Q9C075 422 aa23.25■■□□□ 1.31
DUSP28-203ENST00000438823 RAVER2Q9HCJ3 691 aaKnown RBP23.25■■□□□ 1.31
DUSP28-203ENST00000438823 DNAJC25-GNG10A0A024R161 153 aa23.24■■□□□ 1.31
DUSP28-203ENST00000438823 MNX1P50219 401 aaPredicted RBP23.24■■□□□ 1.31
DUSP28-203ENST00000438823 TKFCQ3LXA3 575 aa23.24■■□□□ 1.31
DUSP28-203ENST00000438823 BTNL9Q6UXG8 535 aa23.24■■□□□ 1.31
DUSP28-203ENST00000438823 KCTD1Q719H9 257 aa23.24■■□□□ 1.31
DUSP28-203ENST00000438823 CCDC96Q2M329 555 aa23.23■■□□□ 1.31
DUSP28-203ENST00000438823 ZNF467Q7Z7K2 595 aaPredicted RBP23.23■■□□□ 1.31
DUSP28-203ENST00000438823 DPF3Q92784 378 aa23.23■■□□□ 1.31
DUSP28-203ENST00000438823 PRR12Q9ULL5 1215 aa23.23■■□□□ 1.31
DUSP28-203ENST00000438823 ALPK3Q96L96 1907 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 SEPT4O43236 478 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 PGK2P07205 417 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 SNHG28P0DPA3 235 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 PDHBP11177 359 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 DIS3LQ8TF46 1054 aaKnown RBP23.22■■□□□ 1.31
DUSP28-203ENST00000438823 ANKS1AQ92625 1134 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 DDX11Q96FC9 970 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 TINF2Q9BSI4 451 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 C11orf49Q9H6J7 331 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 NR2E3Q9Y5X4 410 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 ZNF536O15090 1300 aa23.22■■□□□ 1.31
DUSP28-203ENST00000438823 SGSM2O43147 1006 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 KDM4AO75164 1064 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 CNGA1P29973 690 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 MAMDC4Q6UXC1 1216 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 ACAD9Q9H845 621 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 PNMA2Q9UL42 364 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 SYNGAP1Q96PV0 1343 aa23.21■■□□□ 1.31
DUSP28-203ENST00000438823 B4E1Z4 1266 aa23.2■■□□□ 1.3
DUSP28-203ENST00000438823 COL6A1P12109 1028 aa23.2■■□□□ 1.3
DUSP28-203ENST00000438823 ZNF543Q08ER8 600 aa23.2■■□□□ 1.3
DUSP28-203ENST00000438823 GPATCH4Q5T3I0 446 aaKnown RBP23.2■■□□□ 1.3
DUSP28-203ENST00000438823 RASGRP2Q7LDG7 609 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms