RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 ATL3Q6DD88 541 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 KCTD1Q719H9 257 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 SAPCD2Q86UD0 394 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 WRNIP1Q96S55 665 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 ZIC5Q96T25 663 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 PHF20Q9BVI0 1012 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 KCNJ14Q9UNX9 436 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 MYH4Q9Y623 1939 aa14.26□□□□□ -0.13
HLA-DOB-206ENST00000438763 ADM5C9JUS6 153 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 RAD21O60216 631 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 CELF2O95319 508 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 BMP3P12645 472 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 KRT85P78386 507 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 NOL9Q5SY16 702 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 FAM173BQ6P4H8 233 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 BTNL9Q6UXG8 535 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 PIBF1Q8WXW3 757 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 MTMR8Q96EF0 704 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 WDR18Q9BV38 432 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 CPVLQ9H3G5 476 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 VAT1LQ9HCJ6 419 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 VPS54Q9P1Q0 977 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 SEC63Q9UGP8 760 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
HLA-DOB-206ENST00000438763 hCG_1984214I3L0E3 225 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 NBR1Q14596 966 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 DIS3L2Q8IYB7 885 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 ADGRF4Q8IZF3 695 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 ZNF713Q8N859 430 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 TMEM87AQ8NBN3 555 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 SHISA4Q96DD7 197 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 ZNF396Q96N95 335 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 PIGSQ96S52 555 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 KIAA1683Q9H0B3 1180 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 JMJD4Q9H9V9 463 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 AS3MTQ9HBK9 375 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 PICK1Q9NRD5 415 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 CNPY2Q9Y2B0 182 aa14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 POLR2AP24928 1970 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-206ENST00000438763 PNMA6FA0A0J9YX94 578 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 BTBD18B2RXH4 712 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 PLA2G6O60733 806 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 PRPF40AO75400 957 aaKnown RBP14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 CALML3P27482 149 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 NF2P35240 595 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 SLC16A2P36021 539 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 NLRP5P59047 1200 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 MAP3K9P80192 1104 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 GALNT17Q6IS24 598 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 ZKSCAN4Q969J2 545 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 CDCA5Q96FF9 252 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 GLIS2Q9BZE0 524 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 SCAND2PQ9GZW5 306 aaPredicted RBP14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 ZNF408Q9H9D4 720 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 LMBRD1Q9NUN5 540 aa14.23□□□□□ -0.13
HLA-DOB-206ENST00000438763 USP17L10C9JJH3 530 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 STXBP3O00186 592 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 PTPRAP18433 802 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 NCLP19338 710 aaKnown RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 KRT2P35908 639 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 USP14P54578 494 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 KIAA1755Q5JYT7 1200 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 DLK2Q6UY11 383 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 CCDC84Q86UT8 332 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 HOMER1Q86YM7 354 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 CHURC1Q8WUH1 139 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 LPAR1Q92633 364 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 NUP88Q99567 741 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 FEZ1Q99689 392 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 TFIP11Q9UBB9 837 aaKnown RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 MYH6P13533 1939 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 ZBTB5O15062 677 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 IREB2P48200 963 aaKnown RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 NPY5RQ15761 445 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 SKOR2Q2VWA4 1001 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 SYDE2Q5VT97 1194 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 NOSTRINQ8IVI9 506 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms