RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 R3HCC1Q9Y3T6 440 aaKnown RBP12.61□□□□□ -0.39
ERGIC3-207ENST00000438317 LRRC37AA6NMS7 1700 aa12.61□□□□□ -0.39
ERGIC3-207ENST00000438317 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
ERGIC3-207ENST00000438317 MYH1P12882 1939 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 CDK5RAP2Q96SN8 1893 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 SCG2P13521 617 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 PTGS1P23219 599 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 TFAP4Q01664 338 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 DNTTIP2Q5QJE6 756 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 TRIML1Q8N9V2 468 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 ZNF296Q8WUU4 475 aaPredicted RBP12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 CDCA5Q96FF9 252 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 DACH1Q9UI36 760 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 FAM205AQ6ZU69 1335 aa12.6□□□□□ -0.39
ERGIC3-207ENST00000438317 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 CBFA2T2O43439 604 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 UFL1O94874 794 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 TBC1D8O95759 1140 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 USP17L8P0C7I0 530 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 SMARCA1P28370 1054 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 NR5A1Q13285 461 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 LONRF3Q496Y0 759 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 FAM47AQ5JRC9 791 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 RCSD1Q6JBY9 416 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 SRBD1Q8N5C6 995 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 KCNF1Q9H3M0 494 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 GGA3Q9NZ52 723 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 POLLQ9UGP5 575 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 PCDHB6Q9Y5E3 794 aa12.59□□□□□ -0.39
ERGIC3-207ENST00000438317 SMIM22K7EJ46 135 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 ECE2O60344 883 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 SMC2O95347 1197 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 PLEKHA8P1O95397 391 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 CYP2D6P10635 497 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 NLRP5P59047 1200 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 GRM4Q14833 912 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 HABP4Q5JVS0 413 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 NT5DC1Q5TFE4 455 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 MLKLQ8NB16 471 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 HDAC9Q9UKV0 1011 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
ERGIC3-207ENST00000438317 BIN1O00499 593 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 NRDCO43847 1150 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 SARSP49591 514 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 MYL5Q02045 173 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 MOB2Q70IA6 237 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 LRRC8AQ8IWT6 810 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 PNMA1Q8ND90 353 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 NEDD1Q8NHV4 660 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 TGFBRAP1Q8WUH2 860 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 TNFRSF25Q93038 417 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 OSBPL5Q9H0X9 879 aaPredicted RBP12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 SCN9AQ15858 1988 aa12.57□□□□□ -0.4
ERGIC3-207ENST00000438317 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 GPR25O00155 361 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 DYNC1I1O14576 645 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 POLR2DO15514 142 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 BTDP43251 543 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 TM4SF4P48230 202 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 FKBP1BP68106 108 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 PNOCQ13519 176 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 NCAPHQ15003 741 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 POSTNQ15063 836 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 FBXO46Q6PJ61 603 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 C16orf86Q6ZW13 317 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 METTL16Q86W50 562 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 TEX11Q8IYF3 940 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 CCDC148Q8NFR7 591 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 IL17RBQ9NRM6 502 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 SERTAD1Q9UHV2 236 aa12.56□□□□□ -0.4
ERGIC3-207ENST00000438317 NRBP1Q9UHY1 535 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms