RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 ETV3P41162 512 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 MRPS35P82673 323 aaKnown RBP7.21□□□□□ -1.26
MCF2-205ENST00000437564 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
MCF2-205ENST00000437564 POU5F1BQ06416 359 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 SNW1Q13573 536 aaKnown RBP7.21□□□□□ -1.26
MCF2-205ENST00000437564 LRP8Q14114 963 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 DPYSQ14117 519 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 SEPT6Q14141 434 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 MAPRE1Q15691 268 aaKnown RBP7.21□□□□□ -1.26
MCF2-205ENST00000437564 IRGCQ6NXR0 463 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 ZNF365Q70YC5 407 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 BEND5Q7L4P6 421 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 SPERTQ8NA61 448 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 IRGQQ8WZA9 623 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 DPF3Q92784 378 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 CNKSR1Q969H4 720 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 PDE11AQ9HCR9 933 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 TYW1Q9NV66 732 aaKnown RBP7.21□□□□□ -1.26
MCF2-205ENST00000437564 TBK1Q9UHD2 729 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 PCDHGB3Q9Y5G1 929 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 ATP10AO60312 1499 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 ABCC11Q96J66 1382 aa7.21□□□□□ -1.26
MCF2-205ENST00000437564 PSDA5PKW4 1024 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 KIF5BP33176 963 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 TSPAN7P41732 249 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 UBXN2AP68543 259 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 MXRA7P84157 204 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 LMNB2Q03252 620 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 MSLNQ13421 630 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 RIPK1Q13546 671 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 TAF11Q15544 211 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 NFE2L2Q16236 605 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 FAM117BQ6P1L5 589 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 KIRREL3Q8IZU9 778 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 ARHGAP18Q8N392 663 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 APPL2Q8NEU8 664 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.2□□□□□ -1.26
MCF2-205ENST00000437564 SKA1Q96BD8 255 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 SNF8Q96H20 258 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 IER2Q9BTL4 223 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 DNAI2Q9GZS0 605 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 DRC3Q9H069 523 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 NSRP1Q9H0G5 558 aaKnown RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 FAM204AQ9H8W3 233 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 SCHIP1Q9P0W5 487 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 KIAA1522Q9P206 1035 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 CCPG1Q9ULG6 757 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 A0A1B0GVG6 124 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 C2orf81A6NN90 581 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 ZNF254O75437 659 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 FLOT1O75955 427 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 COL6A1P12109 1028 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 HCLS1P14317 486 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 AARSP49588 968 aaKnown RBP eCLIP7.2□□□□□ -1.26
MCF2-205ENST00000437564 MDM2Q00987 491 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 KIF5AQ12840 1032 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 MRPL28Q13084 256 aaKnown RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 NMIQ13287 307 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 SPIDRQ14159 915 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 DGLUCYQ7Z3D6 616 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 TMC4Q7Z404 712 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 CABP7Q86V35 215 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 ERICH1Q86X53 443 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 CRACR2BQ8N4Y2 399 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 SLC16A10Q8TF71 515 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 CDKL2Q92772 493 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 P3H4Q92791 437 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 C1orf74Q96LT6 269 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 NDNQ99608 321 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 SIL1Q9H173 461 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 CNNM2Q9H8M5 875 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
MCF2-205ENST00000437564 TBCCD1Q9NVR7 557 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 C2CD2Q9Y426 696 aa7.2□□□□□ -1.26
MCF2-205ENST00000437564 KDM5BQ9UGL1 1544 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 MYBBP1AQ9BQG0 1328 aaKnown RBP7.19□□□□□ -1.26
MCF2-205ENST00000437564 USO1O60763 962 aaKnown RBP7.19□□□□□ -1.26
MCF2-205ENST00000437564 UBL4AP11441 157 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 KRT9P35527 623 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 SLC16A2P36021 539 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 MTTPP55157 894 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 GEMIN4P57678 1058 aaKnown RBP7.19□□□□□ -1.26
MCF2-205ENST00000437564 EVCP57679 992 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 BPIFB4P59827 614 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 SPCS2Q15005 226 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 PROSER3Q2NL68 480 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 CMPK2Q5EBM0 449 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 KANK4Q5T7N3 995 aaPredicted RBP7.19□□□□□ -1.26
MCF2-205ENST00000437564 GKAP1Q5VSY0 366 aaPredicted RBP7.19□□□□□ -1.26
MCF2-205ENST00000437564 MCM10Q7L590 875 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 FUKQ8N0W3 1084 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 SCAIQ8N9R8 606 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 WDR60Q8WVS4 1066 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 SDCCAG3Q96C92 435 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 CLIC6Q96NY7 704 aa7.19□□□□□ -1.26
MCF2-205ENST00000437564 GPR101Q96P66 508 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms