RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 H7C1D1 291 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 BIN1O00499 593 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 RASA1P20936 1047 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 RPS12P25398 132 aaKnown RBP13.62□□□□□ -0.23
CTCFL-209ENST00000433949 PNOCQ13519 176 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
CTCFL-209ENST00000433949 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 SLC44A5Q8NCS7 719 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 PYM1Q9BRP8 204 aaKnown RBP13.62□□□□□ -0.23
CTCFL-209ENST00000433949 IMPACTQ9P2X3 320 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 ZNF70Q9UC06 446 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-209ENST00000433949 DACH1Q9UI36 760 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 SBF1O95248 1867 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 hCG_1642624A0A1W2PR95 340 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 POLR2DO15514 142 aaKnown RBP13.61□□□□□ -0.23
CTCFL-209ENST00000433949 GSDMDP57764 484 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 MDM2Q00987 491 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-209ENST00000433949 POSTNQ15063 836 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 DPF2Q92785 391 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
CTCFL-209ENST00000433949 A0A087WWV3 80 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 ATP2B1P20020 1258 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 CDK8P49336 464 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 MYL5Q02045 173 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 NEDD1Q8NHV4 660 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 GPRC5DQ9NZD1 345 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 R3HCC1Q9Y3T6 440 aaKnown RBP13.6□□□□□ -0.23
CTCFL-209ENST00000433949 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 ATP2C1P98194 919 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-209ENST00000433949 KIF4BQ2VIQ3 1234 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-209ENST00000433949 OSBPL5Q9H0X9 879 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-209ENST00000433949 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 STX8Q9UNK0 236 aa13.6□□□□□ -0.23
CTCFL-209ENST00000433949 DDTLA6NHG4 134 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 NCAPHQ15003 741 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 SMARCE1Q969G3 411 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 NRBP1Q9UHY1 535 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 PALM3A6NDB9 673 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 SMC2O95347 1197 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 GRIN1Q05586 938 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 SPECC1Q5M775 1068 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 LRRC8AQ8IWT6 810 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 CDAN1Q8IWY9 1227 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 DAGLBQ8NCG7 672 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 CCDC12Q8WUD4 166 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-209ENST00000433949 SPZ1Q9BXG8 430 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 PYCARDQ9ULZ3 195 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 PCDHA4Q9UN74 947 aa13.59□□□□□ -0.23
CTCFL-209ENST00000433949 PSME4Q14997 1843 aa13.58□□□□□ -0.23
CTCFL-209ENST00000433949 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 CBFA2T2O43439 604 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
CTCFL-209ENST00000433949 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
CTCFL-209ENST00000433949 LMOD1P29536 600 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-209ENST00000433949 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 SPATA20Q8TB22 786 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 SERTAD1Q9UHV2 236 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 NOVP48745 357 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-209ENST00000433949 PTGDRQ13258 359 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 PIK3AP1Q6ZUJ8 805 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-209ENST00000433949 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 IDI2Q9BXS1 227 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 HACL1Q9UJ83 578 aa13.58□□□□□ -0.24
CTCFL-209ENST00000433949 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
CTCFL-209ENST00000433949 ANGEL2Q5VTE6 544 aaKnown RBP13.57□□□□□ -0.24
CTCFL-209ENST00000433949 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
CTCFL-209ENST00000433949 ZBED3Q96IU2 234 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-209ENST00000433949 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
CTCFL-209ENST00000433949 NRDCO43847 1150 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
CTCFL-209ENST00000433949 ZNF174Q15697 407 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 DLK2Q6UY11 383 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 ZNF526Q8TF50 670 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-209ENST00000433949 CSRNP1Q96S65 589 aa13.56□□□□□ -0.24
CTCFL-209ENST00000433949 XPO4Q9C0E2 1151 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms