RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 CEP57L1Q8IYX8 460 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 IFNL3Q8IZI9 196 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 SYNE4Q8N205 404 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 FSIP1Q8NA03 581 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 NLGN2Q8NFZ4 835 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF526Q8TF50 670 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-204ENST00000433822 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 LY9Q9HBG7 655 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 GNL3LQ9NVN8 582 aaKnown RBP8.59□□□□□ -1.03
COL17A1-204ENST00000433822 BSDC1Q9NW68 430 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-204ENST00000433822 PCDHA7Q9UN72 937 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 QSER1Q2KHR3 1735 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 ECM29Q5VYK3 1845 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 CACNA1SQ13698 1873 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 GSG1L2A8MUP6 293 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 GOLGA6L19H0YKK7 550 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 PLSCR1O15162 318 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 AP5Z1O43299 807 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 FGRP09769 529 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 KCNJ6P48051 423 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 ME1P48163 572 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 HAND2P61296 217 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 STK38Q15208 465 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-204ENST00000433822 CYB5R4Q7L1T6 521 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 DNAJC5GQ8N7S2 189 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 MARCH10Q8NA82 808 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-204ENST00000433822 MYRIPQ8NFW9 859 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 BRIP1Q9BX63 1249 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 GOLPH3LQ9H4A5 285 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 EPB41L4AQ9HCS5 686 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-204ENST00000433822 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 IMPACTQ9P2X3 320 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 WWC3Q9ULE0 1092 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 HPSEQ9Y251 543 aa8.58□□□□□ -1.04
COL17A1-204ENST00000433822 NEDD4P46934 1319 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 NHSQ6T4R5 1651 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 GOLGA8AA7E2F4 631 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 IKBKBO14920 756 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 CUTAO60888 179 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 MBD4O95243 580 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 IARSP41252 1262 aaKnown RBP8.57□□□□□ -1.04
COL17A1-204ENST00000433822 PTGIRP43119 386 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 GSDMDP57764 484 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 CHRNDQ07001 517 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 ITPK1Q13572 414 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 TRIM29Q14134 588 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 GAS6Q14393 721 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 SLC15A2Q16348 729 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 CAMK4Q16566 473 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 KRT40Q6A162 431 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 MFSD6Q6ZSS7 791 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 LUZP1Q86V48 1076 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 VPS37DQ86XT2 251 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 CKAP2LQ8IYA6 745 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 FAM177A1Q8N128 213 aaPredicted RBP8.57□□□□□ -1.04
COL17A1-204ENST00000433822 MAGEB6Q8N7X4 407 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
COL17A1-204ENST00000433822 GMCL1Q96IK5 515 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 ALG1Q9BT22 464 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 FOXP1Q9H334 677 aaPredicted RBP8.57□□□□□ -1.04
COL17A1-204ENST00000433822 TUBE1Q9UJT0 475 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 DENND2AQ9ULE3 1009 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 NIP7Q9Y221 180 aaKnown RBP eCLIP8.57□□□□□ -1.04
COL17A1-204ENST00000433822 SLC12A7Q9Y666 1083 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 BTAF1O14981 1849 aa8.57□□□□□ -1.04
COL17A1-204ENST00000433822 ERICH2A1L162 156 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC69A6NI79 296 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 PHF20L1A8MW92 1017 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 B4E1Z4 1266 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 BMP15O95972 392 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 APPP05067 770 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CALM1P0DP23 149 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CALM2P0DP24 149 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CALM3P0DP25 149 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 TPM4P67936 248 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 SSRP1Q08945 709 aaKnown RBP8.56□□□□□ -1.04
COL17A1-204ENST00000433822 PTPAQ15257 358 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 NR6A1Q15406 480 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 SF3A1Q15459 793 aaKnown RBP8.56□□□□□ -1.04
COL17A1-204ENST00000433822 TMEM67Q5HYA8 995 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CT47A1Q5JQC4 288 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CHST3Q7LGC8 479 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CERS3Q8IU89 383 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 ANKRD18AQ8IVF6 992 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 TRIM22Q8IYM9 498 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-204ENST00000433822 MAP3K14Q99558 947 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 RNF26Q9BY78 433 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-204ENST00000433822 TRIM5Q9C035 493 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 DNAJC25Q9H1X3 360 aa8.56□□□□□ -1.04
COL17A1-204ENST00000433822 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms