RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.01■□□□□ 0.95
CNOT9-204ENST00000432877 KLHDC9Q8NEP7 349 aa21.01■□□□□ 0.95
CNOT9-204ENST00000432877 MAFAQ8NHW3 353 aaPredicted RBP21.01■□□□□ 0.95
CNOT9-204ENST00000432877 RNPC3Q96LT9 517 aaKnown RBP21.01■□□□□ 0.95
CNOT9-204ENST00000432877 SYNPO2Q9UMS6 1093 aa21.01■□□□□ 0.95
CNOT9-204ENST00000432877 PQBP1O60828 265 aaKnown RBP21■□□□□ 0.95
CNOT9-204ENST00000432877 DUSP11O75319 330 aaKnown RBP21■□□□□ 0.95
CNOT9-204ENST00000432877 ITGB8P26012 769 aa21■□□□□ 0.95
CNOT9-204ENST00000432877 ACLYP53396 1101 aa21■□□□□ 0.95
CNOT9-204ENST00000432877 FPGSQ05932 587 aa21■□□□□ 0.95
CNOT9-204ENST00000432877 SNRNP48Q6IEG0 339 aaKnown RBP21■□□□□ 0.95
CNOT9-204ENST00000432877 MIER1Q8N108 512 aa21■□□□□ 0.95
CNOT9-204ENST00000432877 MKL1Q969V6 931 aa21■□□□□ 0.95
CNOT9-204ENST00000432877 TTYH1Q9H313 450 aaPredicted RBP21■□□□□ 0.95
CNOT9-204ENST00000432877 STARD7Q9NQZ5 370 aa21■□□□□ 0.95
CNOT9-204ENST00000432877 CTDP1Q9Y5B0 961 aaPredicted RBP21■□□□□ 0.95
CNOT9-204ENST00000432877 DNAJC25-GNG10A0A024R161 153 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 SNAI1O95863 264 aaPredicted RBP20.99■□□□□ 0.95
CNOT9-204ENST00000432877 CHGBP05060 677 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 RASA1P20936 1047 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 FAAP100Q0VG06 881 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 FBXO40Q9UH90 709 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 ELP1O95163 1332 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 MROH7Q68CQ1 1323 aa20.99■□□□□ 0.95
CNOT9-204ENST00000432877 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-204ENST00000432877 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-204ENST00000432877 GSG1L2A8MUP6 293 aa20.98■□□□□ 0.95
CNOT9-204ENST00000432877 NDUFB10O96000 172 aa20.98■□□□□ 0.95
CNOT9-204ENST00000432877 GNAT2P19087 354 aa20.98■□□□□ 0.95
CNOT9-204ENST00000432877 CST5P28325 142 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-204ENST00000432877 KCNA10Q16322 511 aa20.98■□□□□ 0.95
CNOT9-204ENST00000432877 CCSAPQ6IQ19 270 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-204ENST00000432877 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-204ENST00000432877 PCSK9Q8NBP7 692 aaKnown RBP20.98■□□□□ 0.95
CNOT9-204ENST00000432877 SPC25Q9HBM1 224 aa20.98■□□□□ 0.95
CNOT9-204ENST00000432877 LTBP2Q14767 1821 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 UNC80Q8N2C7 3258 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 MINDY4BA8MYZ0 360 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 TIMP1P01033 207 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 ZFYP08048 801 aaPredicted RBP20.97■□□□□ 0.95
CNOT9-204ENST00000432877 FDX1P10109 184 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 OAZ1P54368 228 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 CCDC174Q6PII3 467 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 KBTBD3Q8NAB2 608 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 CHST13Q8NET6 341 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 GLT1D1Q96MS3 346 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 ABHD16BQ9H3Z7 469 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 CLIP2Q9UDT6 1046 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 FEM1BQ9UK73 627 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 RIPK3Q9Y572 518 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 SYNRGQ9UMZ2 1314 aa20.97■□□□□ 0.95
CNOT9-204ENST00000432877 IGKV6D-41A0A0C4DH26 115 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 FOSL2P15408 326 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 EPHB4P54760 987 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 ACVR2BQ13705 512 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 LRRFIP1Q32MZ4 808 aaKnown RBP20.96■□□□□ 0.95
CNOT9-204ENST00000432877 MYLIPQ8WY64 445 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 APPBP2Q92624 585 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 NUP88Q99567 741 aaPredicted RBP20.96■□□□□ 0.95
CNOT9-204ENST00000432877 SLC38A10Q9HBR0 1119 aa20.96■□□□□ 0.95
CNOT9-204ENST00000432877 ZHX1Q9UKY1 873 aaPredicted RBP20.96■□□□□ 0.95
CNOT9-204ENST00000432877 RNF113AO15541 343 aaKnown RBP20.95■□□□□ 0.94
CNOT9-204ENST00000432877 CPXCR1Q8N123 301 aa20.95■□□□□ 0.94
CNOT9-204ENST00000432877 ANKRD35Q8N283 1001 aa20.95■□□□□ 0.94
CNOT9-204ENST00000432877 GMCL1P1Q8NEA9 526 aa20.95■□□□□ 0.94
CNOT9-204ENST00000432877 SYMPKQ92797 1274 aaKnown RBP20.95■□□□□ 0.94
CNOT9-204ENST00000432877 PATL2C9JE40 543 aaKnown RBP20.94■□□□□ 0.94
CNOT9-204ENST00000432877 TTLL1O95922 423 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 CDK7P50613 346 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 GJA9P57773 515 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 MFSD5Q6N075 450 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 OSBP2Q969R2 916 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.94■□□□□ 0.94
CNOT9-204ENST00000432877 MTMR4Q9NYA4 1195 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 TBX21Q9UL17 535 aa20.94■□□□□ 0.94
CNOT9-204ENST00000432877 NKX3-2P78367 333 aa20.93■□□□□ 0.94
CNOT9-204ENST00000432877 PPIGQ13427 754 aaKnown RBP eCLIP20.93■□□□□ 0.942e-12■■■□□ 18.1
CNOT9-204ENST00000432877 KIFC2Q96AC6 838 aa20.93■□□□□ 0.94
CNOT9-204ENST00000432877 LENG1Q96BZ8 264 aaPredicted RBP20.93■□□□□ 0.94
CNOT9-204ENST00000432877 UPF3AQ9H1J1 476 aaKnown RBP20.93■□□□□ 0.94
CNOT9-204ENST00000432877 A0A0U1RQG5 324 aaPredicted RBP20.92■□□□□ 0.94
CNOT9-204ENST00000432877 SMARCA5O60264 1052 aaPredicted RBP20.92■□□□□ 0.94
CNOT9-204ENST00000432877 ASGR1P07306 291 aa20.92■□□□□ 0.94
CNOT9-204ENST00000432877 C6orf222P0C671 652 aaPredicted RBP20.92■□□□□ 0.94
CNOT9-204ENST00000432877 SLC4A3P48751 1232 aa20.92■□□□□ 0.94
CNOT9-204ENST00000432877 TDO2P48775 406 aa20.92■□□□□ 0.94
CNOT9-204ENST00000432877 PPP4R3BQ5MIZ7 849 aa20.92■□□□□ 0.94
CNOT9-204ENST00000432877 VTI1AQ96AJ9 217 aa20.92■□□□□ 0.94
CNOT9-204ENST00000432877 RAVER2Q9HCJ3 691 aaKnown RBP20.92■□□□□ 0.94
CNOT9-204ENST00000432877 RCAN3Q9UKA8 241 aa20.92■□□□□ 0.94
CNOT9-204ENST00000432877 SMCHD1A6NHR9 2005 aa20.91■□□□□ 0.94
CNOT9-204ENST00000432877 ARVCFO00192 962 aa20.91■□□□□ 0.94
CNOT9-204ENST00000432877 GPAA1O43292 621 aa20.91■□□□□ 0.94
CNOT9-204ENST00000432877 APPP05067 770 aa20.91■□□□□ 0.94
CNOT9-204ENST00000432877 SLC3A2P08195 630 aaKnown RBP20.91■□□□□ 0.94
CNOT9-204ENST00000432877 BMP3P12645 472 aa20.91■□□□□ 0.94
CNOT9-204ENST00000432877 DNAJB2P25686 324 aa20.91■□□□□ 0.94
CNOT9-204ENST00000432877 PDE4BQ07343 736 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms