RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 STK32BQ9NY57 414 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 COL11A2P13942 1736 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-212ENST00000432645 A0A087X0B3 334 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 GOLGA6L6A8MZA4 724 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 C21orf2O43822 256 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 RAD21O60216 631 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 GNAQP50148 359 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 LRMPQ12912 555 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 DEFB132Q7Z7B7 95 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
HDAC9-212ENST00000432645 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 DLEC1Q9Y238 1755 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 TOP1P11387 765 aaKnown RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 CASP1P29466 404 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 CDC25AP30304 524 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 AFMP43652 599 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 ZSCAN29Q8IWY8 852 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 STAMQ92783 540 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 TUBE1Q9UJT0 475 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 PYCARDQ9ULZ3 195 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 CEP83Q9Y592 693 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 CALML3P27482 149 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 GABPAQ06546 454 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 POSTNQ15063 836 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 CCDC144BQ3MJ40 725 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 HSP90AA4PQ58FG1 418 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 STYK1Q6J9G0 422 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 OSBPL5Q9H0X9 879 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 MTMR4Q9NYA4 1195 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 NRXN2Q9P2S2 1712 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 TULP2O00295 520 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 BMP6P22004 513 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 MDM2Q00987 491 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-212ENST00000432645 INF2Q27J81 1249 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 HHIPL2Q6UWX4 724 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 PIGSQ96S52 555 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
HDAC9-212ENST00000432645 CCDC194A0A1B0GVG4 234 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 STXBP3O00186 592 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 NAPAP54920 295 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 ARID5BQ14865 1188 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-212ENST00000432645 DACT2Q5SW24 774 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 CNKSR1Q969H4 720 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 BARHL2Q9NY43 387 aa9.46□□□□□ -0.89
HDAC9-212ENST00000432645 CDK5RAP2Q96SN8 1893 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 ADAMTSL1Q8N6G6 1762 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 ACTN4O43707 911 aaKnown RBP9.46□□□□□ -0.9
HDAC9-212ENST00000432645 SMC2O95347 1197 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 PDHBP11177 359 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 ATP1A3P13637 1013 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 SHMT1P34896 483 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 ATP2C1P98194 919 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-212ENST00000432645 IL17AQ16552 155 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 STRIP1Q5VSL9 837 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 ZBTB9Q96C00 473 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
HDAC9-212ENST00000432645 PCDHA6Q9UN73 950 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 PCDHA8Q9Y5H6 950 aa9.46□□□□□ -0.9
HDAC9-212ENST00000432645 DDTLA6NHG4 134 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 PPIP5K2O43314 1243 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 NT5C2P49902 561 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 NCAPHQ15003 741 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SARM1Q6SZW1 724 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 FERMT2Q96AC1 680 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 RRP36Q96EU6 259 aaKnown RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SH3GLB2Q9NR46 395 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SEC63Q9UGP8 760 aaKnown RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 MYH1P12882 1939 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SMARCE1Q969G3 411 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 ZDHHC15Q96MV8 337 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 TDRD3Q9H7E2 651 aaKnown RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 IFNKQ9P0W0 207 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 MAN1B1Q9UKM7 699 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SLC16A2P36021 539 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 PTPN21Q16825 1174 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 CACTINQ8WUQ7 758 aaKnown RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 COA7Q96BR5 231 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 MYCBPQ99417 103 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 BPIFA3Q9BQP9 254 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 LZTS2Q9BRK4 669 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 SPZ1Q9BXG8 430 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms