RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 FAM160B1Q5W0V3 765 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 CCDC84Q86UT8 332 aaPredicted RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 FBXO11Q86XK2 927 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 MSL3Q8N5Y2 521 aaKnown RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 SDR42E1Q8WUS8 393 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 EHD4Q9H223 541 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 GINS2Q9Y248 185 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 TTC41PQ6P2S7 1318 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 SHANK3Q9BYB0 1731 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 BAG4O95429 457 aaKnown RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 MTFR1Q15390 333 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 KCNG4Q8TDN1 519 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 SCFD2Q8WU76 684 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 C22orf23Q9BZE7 217 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 PAPPA2Q9BXP8 1791 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 TESPA1A2RU30 521 aaPredicted RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 FAM155AB1AL88 458 aaPredicted RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 VCAM1P19320 739 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 ARID4AP29374 1257 aaPredicted RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 PPP4CP60510 307 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 WTAPQ15007 396 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 Q3C1V9 767 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 FCHSD1Q86WN1 690 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 SUGP1Q8IWZ8 645 aaKnown RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 ANKRD44Q8N8A2 993 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 PATL2C9JE40 543 aaKnown RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 XRCC5P13010 732 aaKnown RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 KCNA4P22459 653 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 TAF12Q16514 161 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 UTP14CQ5TAP6 766 aaKnown RBP5.31□□□□□ -1.56
UBE4A-202ENST00000431736 RCSD1Q6JBY9 416 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 C17orf99Q6UX52 265 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 STAG1Q8WVM7 1258 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 CCDC34Q96HJ3 373 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
UBE4A-202ENST00000431736 WTIPA6NIX2 430 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 ZBTB7BO15156 539 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 GPAA1O43292 621 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 EEF2P13639 858 aaKnown RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 TIFAQ96CG3 184 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 ATG4CQ96DT6 458 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 TINF2Q9BSI4 451 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 AFG3L2Q9Y4W6 797 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 SLX4Q8IY92 1834 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 POTEFA5A3E0 1075 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 PFKMP08237 780 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 KRT32Q14532 448 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 TMEM67Q5HYA8 995 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 GIMAP6Q6P9H5 292 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 DEFB128Q7Z7B8 93 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 NSUN6Q8TEA1 469 aaKnown RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 FAM163AQ96GL9 167 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 COL3A1P02461 1466 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 CARNS1A5YM72 827 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 TLL1O43897 1013 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 DSG3P32926 999 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 PPARAQ07869 468 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 MCMDC2Q4G0Z9 681 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 SECISBP2LQ93073 1101 aaKnown RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 LZTS2Q9BRK4 669 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 CFHR5Q9BXR6 569 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 THEGQ9P2T0 379 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 PCDHA1Q9Y5I3 950 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 ZNF609O15014 1411 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 CDKL5O76039 1030 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 MATR3P43243 847 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 IKBKEQ14164 716 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 MCTP2Q6DN12 878 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 MAFAQ8NHW3 353 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 NCOA7Q8NI08 942 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 HIPK3Q9H422 1215 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 RWDD3Q9Y3V2 267 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 DDTLA6NHG4 134 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 PRDM1O75626 825 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 REC8O95072 547 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 ATP5JP18859 108 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 C6orf50Q9HD87 102 aa5.3□□□□□ -1.56
UBE4A-202ENST00000431736 COLQQ9Y215 455 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-202ENST00000431736 ZNF536O15090 1300 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 CSPG5O95196 566 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 TXNP10599 105 aaKnown RBP5.29□□□□□ -1.56
UBE4A-202ENST00000431736 FAM117BQ6P1L5 589 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 CATSPERGQ6ZRH7 1159 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 KBTBD3Q8NAB2 608 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 CCDC148Q8NFR7 591 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 BICD2Q8TD16 824 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 LNPKQ9C0E8 428 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 NEDD9Q14511 834 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 ASPRV1Q53RT3 343 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 MYOCDQ8IZQ8 938 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 ABRAQ8N0Z2 381 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 TSEN34Q9BSV6 310 aaKnown RBP5.29□□□□□ -1.56
UBE4A-202ENST00000431736 C1QTNF1Q9BXJ1 281 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 AMNQ9BXJ7 453 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 IRF2BPLQ9H1B7 796 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 VTA1Q9NP79 307 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 NYAP2Q9P242 653 aa5.29□□□□□ -1.56
UBE4A-202ENST00000431736 ABCB11O95342 1321 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms