RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 RPGRQ92834 1020 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 PAG1Q9NWQ8 432 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 N4BP3O15049 544 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CETN1Q12798 172 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC42Q96M95 316 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 FAM96AQ9H5X1 160 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 BICC1Q9H694 974 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 DENND2CQ68D51 928 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CHST3Q7LGC8 479 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 NLRP9Q7RTR0 991 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 LZTFL1Q9NQ48 299 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 SLC27A2O14975 620 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 FAM107AO95990 144 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 SAMD1Q6SPF0 538 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 ARHGAP27Q6ZUM4 889 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 TMCO5AQ8N6Q1 288 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CPA1P15085 419 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 BICDL1Q6ZP65 573 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 PSMA7O14818 248 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 ZBTB43O43298 467 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 NCAPH2Q6IBW4 605 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 FRA10AC1Q70Z53 315 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 C1orf131Q8NDD1 294 aaKnown RBP8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 COG1Q8WTW3 980 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 TRIM63Q969Q1 353 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 UTP11Q9Y3A2 253 aaKnown RBP8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 MROH2AA6NES4 1674 aa8.27□□□□□ -1.08
SYNPO2-202ENST00000429713 EFCAB6Q5THR3 1501 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 NR1D1P20393 614 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 HEATR3Q7Z4Q2 680 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 CTDP1Q9Y5B0 961 aaPredicted RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 FRMPD1Q5SYB0 1578 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 AFMP43652 599 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 USP5P45974 858 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 TUBA1BP68363 451 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PPP1R7Q15435 360 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 TUBA1AQ71U36 451 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PPP2R2CQ9Y2T4 447 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 KIAA0232Q92628 1395 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PTPDC1A2A3K4 754 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 E7EVH7 732 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 EIF3DO15371 548 aaKnown RBP eCLIP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 MTIF2P46199 727 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 HHATQ5VTY9 493 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 EIF1ADQ8N9N8 165 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 ZNF287Q9HBT7 754 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PRPF6O94906 941 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 SERPINB4P48594 390 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC113Q9H0I3 377 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 VIL1P09327 827 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PAPOLAP51003 745 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 DNA2P51530 1060 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PA2G4Q9UQ80 394 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 PNMA6EA0A0J9YXQ4 647 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 ZBTB16Q05516 673 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 TIMMDC1Q9NPL8 285 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
SYNPO2-202ENST00000429713 KNL1Q8NG31 2342 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 STAT6P42226 847 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 CALCOCO2Q13137 446 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 RIPK1Q13546 671 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC122Q5T0U0 273 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 KSR2Q6VAB6 950 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 EPS15L1Q9UBC2 864 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 PUF60Q9UHX1 559 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ZFYVE16Q7Z3T8 1539 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 A0A1B0GW55 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DIAPH2O60879 1101 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4L2P0CJ85 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4L3P0CJ86 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4L4P0CJ87 422 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4L5P0CJ88 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4L6P0CJ89 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4L7P0CJ90 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 MAP3K7CLP57077 242 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP2B2Q01814 1243 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 PLA2G4DQ86XP0 818 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 DUX4Q9UBX2 424 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 PLCB3Q01970 1234 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 IQCB1Q15051 598 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 TDRD12Q587J7 1177 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ANKRD13DQ6ZTN6 518 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 POTEB3A0JP26 581 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ANXA1P04083 346 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 SSBP05455 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 ANXA13P27216 316 aa8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNPO2-202ENST00000429713 HSPA13P48723 471 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms