RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 FCGRTP55899 365 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 ERVK-9P63128 1117 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 ERVK-24P63145 666 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
SGCE-204ENST00000428696 ZNF543Q08ER8 600 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 FAM110CQ1W6H9 321 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 Q6ZUG5 572 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 PRDM10Q9NQV6 1147 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 TRIM17Q9Y577 477 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
SGCE-204ENST00000428696 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
SGCE-204ENST00000428696 GREB1LQ9C091 1923 aaPredicted RBP17■□□□□ 0.31
SGCE-204ENST00000428696 MYH4Q9Y623 1939 aa17■□□□□ 0.31
SGCE-204ENST00000428696 VWA5AO00534 786 aa17■□□□□ 0.31
SGCE-204ENST00000428696 TNPO2O14787 897 aaKnown RBP17■□□□□ 0.31
SGCE-204ENST00000428696 RXRAP19793 462 aa17■□□□□ 0.31
SGCE-204ENST00000428696 CCNA1P78396 465 aa17■□□□□ 0.31
SGCE-204ENST00000428696 POTEEQ6S8J3 1075 aa17■□□□□ 0.31
SGCE-204ENST00000428696 NCAPG2Q86XI2 1143 aa17■□□□□ 0.31
SGCE-204ENST00000428696 CPVLQ9H3G5 476 aa17■□□□□ 0.31
SGCE-204ENST00000428696 RAVER2Q9HCJ3 691 aaKnown RBP17■□□□□ 0.31
SGCE-204ENST00000428696 PRR12Q9ULL5 1215 aa17■□□□□ 0.31
SGCE-204ENST00000428696 LOC285556D6RIA3 1793 aa17■□□□□ 0.31
SGCE-204ENST00000428696 TMEM132BQ14DG7 1078 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SGCE-204ENST00000428696 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
SGCE-204ENST00000428696 SYDE2Q5VT97 1194 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 RUFY3Q7L099 469 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 ZNF654Q8IZM8 581 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 MB21D1Q8N884 522 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 CTCFLQ8NI51 663 aaPredicted RBP16.99■□□□□ 0.31
SGCE-204ENST00000428696 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 SPATC1LQ9H0A9 340 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 MORF4L1Q9UBU8 362 aa16.99■□□□□ 0.31
SGCE-204ENST00000428696 KLF18A0A0U1RQI7 1052 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 KLRF2D3W0D1 207 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 CNMDO75829 334 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 STAT3P40763 770 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 APOBRQ0VD83 1088 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 ASPRV1Q53RT3 343 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 STAG2Q8N3U4 1231 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 BRF1Q92994 677 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 COA7Q96BR5 231 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 LARP6Q9BRS8 491 aaKnown RBP16.98■□□□□ 0.31
SGCE-204ENST00000428696 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 PORCNQ9H237 461 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 MYPNQ86TC9 1320 aa16.98■□□□□ 0.31
SGCE-204ENST00000428696 HOXD10P28358 340 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 LIFRP42702 1097 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 COL13A1Q5TAT6 717 aaPredicted RBP16.97■□□□□ 0.31
SGCE-204ENST00000428696 CTU1Q7Z7A3 348 aaKnown RBP16.97■□□□□ 0.31
SGCE-204ENST00000428696 MICU3Q86XE3 530 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
SGCE-204ENST00000428696 HOMER2Q9NSB8 354 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 WDR19Q8NEZ3 1342 aa16.97■□□□□ 0.31
SGCE-204ENST00000428696 ZBTB43O43298 467 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 CTGFP29279 349 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 MAPK4P31152 587 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 KIF5BP33176 963 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 ANAPC15P60006 121 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 CAP1Q01518 475 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
SGCE-204ENST00000428696 OTOP1Q7RTM1 612 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 SLC38A10Q9HBR0 1119 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 IVNS1ABPQ9Y6Y0 642 aa16.96■□□□□ 0.31
SGCE-204ENST00000428696 DDAH1O94760 285 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 CALM1P0DP23 149 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 CALM2P0DP24 149 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 CALM3P0DP25 149 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 ERCC3P19447 782 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 TROAPQ12815 778 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 GRM4Q14833 912 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.3
SGCE-204ENST00000428696 ADGRF4Q8IZF3 695 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.3
SGCE-204ENST00000428696 AGBL1Q96MI9 1066 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 MAD2L2Q9UI95 211 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 ADAMTS5Q9UNA0 930 aa16.96■□□□□ 0.3
SGCE-204ENST00000428696 GOLGA8BA8MQT2 603 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 PLA2G6O60733 806 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 ALAS1P13196 640 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 NEK4P51957 841 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 PLEKHH3Q7Z736 793 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 HOMER1Q86YM7 354 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 FANCBQ8NB91 859 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 RAET1EQ8TD07 263 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 TEX13BQ9BXU2 312 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms