RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 LINC00301Q8NCQ3 95 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 RBM46Q8TBY0 533 aaKnown RBP10.42□□□□□ -0.74
NR1I3-209ENST00000428574 TNFRSF25Q93038 417 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 KLRG1Q96E93 195 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 C12orf42Q96LP6 360 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 JMJD4Q9H9V9 463 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 C6orf50Q9HD87 102 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 VPS54Q9P1Q0 977 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 FEM1BQ9UK73 627 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 SSC5DA1L4H1 1573 aa10.42□□□□□ -0.74
NR1I3-209ENST00000428574 MYH6P13533 1939 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 ASTN2O75129 1339 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-209ENST00000428574 A0A1W2PQ27 194 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 A0A1W2PQ64 194 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 A0A1W2PQD8 194 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 A0A1W2PRG0 241 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 BTBD18B2RXH4 712 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 KIF28PB7ZC32 967 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 C19orf81C9J6K1 198 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 M0R2N6 131 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 PPP1R12BO60237 982 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-209ENST00000428574 GOLGA8HP0CJ92 632 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 JAG1P78504 1218 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 ATP2B2Q01814 1243 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 SLC39A14Q15043 492 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 MAP3K11Q16584 847 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 NBPF12Q5TAG4 269 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-209ENST00000428574 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 OTUD7BQ6GQQ9 843 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 KRT25Q7Z3Z0 450 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 CLEC10AQ8IUN9 316 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.41□□□□□ -0.74
NR1I3-209ENST00000428574 USP28Q96RU2 1077 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 TAF1DQ9H5J8 278 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-209ENST00000428574 PICK1Q9NRD5 415 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 PAPPA2Q9BXP8 1791 aa10.41□□□□□ -0.74
NR1I3-209ENST00000428574 GOLGA6L4A6NEF3 574 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 TRIM75PA6NK02 468 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 USP17L10C9JJH3 530 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 LAD1O00515 517 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 LETM1O95202 739 aaPredicted RBP10.4□□□□□ -0.74
NR1I3-209ENST00000428574 NAPAP54920 295 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 SYDE2Q5VT97 1194 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 ADALQ6DHV7 355 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 MIGA2Q7L4E1 593 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 KRT26Q7Z3Y9 468 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 HEATR3Q7Z4Q2 680 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 SAMD3Q8N6K7 520 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 PIGSQ96S52 555 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 WRNIP1Q96S55 665 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 NAP1L4Q99733 375 aaKnown RBP10.4□□□□□ -0.74
NR1I3-209ENST00000428574 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 RIC8AQ9NPQ8 531 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 KCNJ14Q9UNX9 436 aa10.4□□□□□ -0.74
NR1I3-209ENST00000428574 ATAD5Q96QE3 1844 aa10.4□□□□□ -0.75
NR1I3-209ENST00000428574 FRMPD2Q68DX3 1309 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 MYPNQ86TC9 1320 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 UBE2Q2LH0YL09 131 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 SPTLC2O15270 562 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 PTPRAP18433 802 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 IREB2P48200 963 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 ADCY7P51828 1080 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 MRPL12P52815 198 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 BACE1P56817 501 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 FKBP1BP68106 108 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 STK38Q15208 465 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 ARL6IP4Q66PJ3 421 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 KCTD1Q719H9 257 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 REXO1Q8N1G1 1221 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 ZNF579Q8NAF0 562 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 ZNF280CQ8ND82 737 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 SHISA4Q96DD7 197 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 FEZ1Q99689 392 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 RANBP17Q9H2T7 1088 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 GPCPD1Q9NPB8 672 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 GJB4Q9NTQ9 266 aa10.39□□□□□ -0.75
NR1I3-209ENST00000428574 DDX19AQ9NUU7 478 aaKnown RBP10.39□□□□□ -0.75
NR1I3-209ENST00000428574 GOLGB1Q14789 3259 aaKnown RBP10.38□□□□□ -0.75
NR1I3-209ENST00000428574 FAM237AA0A1B0GTK4 181 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 CCDC194A0A1B0GVG4 234 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 DTNBO60941 627 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 ECE1P42892 770 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 FOSBP53539 338 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 NR5A1Q13285 461 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 AP3B2Q13367 1082 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 PTPAQ15257 358 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 CDC37Q16543 378 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-209ENST00000428574 SHROOM1Q2M3G4 852 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-209ENST00000428574 FAM173BQ6P4H8 233 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 PRPF38AQ8NAV1 312 aaKnown RBP10.38□□□□□ -0.75
NR1I3-209ENST00000428574 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 ACER1Q8TDN7 264 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 GPKOWQ92917 476 aaPredicted RBP eCLIP10.38□□□□□ -0.754e-7■■■■■ 40.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms