RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 MAMDC4Q6UXC1 1216 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 MSL3Q8N5Y2 521 aaKnown RBP14.03□□□□□ -0.16
DDX39B-209ENST00000428450 SLC43A3Q8NBI5 491 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 HLA-CQ95604 372 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 VTI1AQ96AJ9 217 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 UPF3AQ9H1J1 476 aaKnown RBP14.03□□□□□ -0.16
DDX39B-209ENST00000428450 SLC4A7Q9Y6M7 1214 aa14.03□□□□□ -0.16
DDX39B-209ENST00000428450 MPHOSPH10O00566 681 aaKnown RBP14.02□□□□□ -0.17
DDX39B-209ENST00000428450 GTPBP6O43824 516 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-209ENST00000428450 STAT3P40763 770 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 CCL23P55773 120 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 GJA9P57773 515 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 CERS3Q8IU89 383 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 ZNF512BQ96KM6 892 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-209ENST00000428450 DBNDD2Q9BQY9 259 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 HIPK3Q9H422 1215 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 ZHX1Q9UKY1 873 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-209ENST00000428450 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-209ENST00000428450 NOB1Q9ULX3 412 aaKnown RBP14.02□□□□□ -0.17
DDX39B-209ENST00000428450 TMX2Q9Y320 296 aa14.02□□□□□ -0.17
DDX39B-209ENST00000428450 PARP14Q460N5 1801 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 CA3P07451 260 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 ATP2A2P16615 1042 aaKnown RBP14.01□□□□□ -0.17
DDX39B-209ENST00000428450 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
DDX39B-209ENST00000428450 GNASQ5JWF2 1037 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
DDX39B-209ENST00000428450 CLEC10AQ8IUN9 316 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 REPS2Q8NFH8 660 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 VCPKMTQ9H867 229 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 CERS4Q9HA82 394 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 SMC4Q9NTJ3 1288 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 COL11A1P12107 1806 aaPredicted RBP14.01□□□□□ -0.17
DDX39B-209ENST00000428450 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
DDX39B-209ENST00000428450 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 PNMA6EA0A0J9YXQ4 647 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 VWA5AO00534 786 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 WDR46O15213 610 aaKnown RBP14□□□□□ -0.17
DDX39B-209ENST00000428450 NKX3-2P78367 333 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 NHLH1Q02575 133 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 ACVR2BQ13705 512 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 TNNI3KQ59H18 835 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 TMEM67Q5HYA8 995 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 TMEM179Q6ZVK1 233 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 NOC4LQ9BVI4 516 aaKnown RBP14□□□□□ -0.17
DDX39B-209ENST00000428450 GPR108Q9NPR9 543 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 FPGT-TNNI3KV9GXZ4 949 aa14□□□□□ -0.17
DDX39B-209ENST00000428450 GRIN2DO15399 1336 aa13.99□□□□□ -0.17
DDX39B-209ENST00000428450 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
DDX39B-209ENST00000428450 ARHGEF15O94989 841 aa13.99□□□□□ -0.17
DDX39B-209ENST00000428450 POLR3DP05423 398 aaPredicted RBP13.99□□□□□ -0.17
DDX39B-209ENST00000428450 CCDC144BQ3MJ40 725 aa13.99□□□□□ -0.17
DDX39B-209ENST00000428450 RPUSD2Q8IZ73 545 aaKnown RBP13.99□□□□□ -0.17
DDX39B-209ENST00000428450 MAGEB6Q8N7X4 407 aa13.99□□□□□ -0.17
DDX39B-209ENST00000428450 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
DDX39B-209ENST00000428450 SPC25Q9HBM1 224 aa13.99□□□□□ -0.17
DDX39B-209ENST00000428450 ZBBXA8MT70 800 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 LPXNO60711 386 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 GNAI3P08754 354 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 COPB2P35606 906 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 TTLL4Q14679 1199 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
DDX39B-209ENST00000428450 FGD4Q96M96 766 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 AGBL1Q96MI9 1066 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 API5Q9BZZ5 524 aaKnown RBP13.98□□□□□ -0.17
DDX39B-209ENST00000428450 TRPV6Q9H1D0 765 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
DDX39B-209ENST00000428450 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
DDX39B-209ENST00000428450 ASTN1O14525 1302 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 E9PSI1 815 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 B4GALT4O60513 344 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 AKR1B1P15121 316 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 BEX3Q00994 111 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 TAP1Q03518 808 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 ICA1Q05084 483 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 GRB10Q13322 594 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 CXCL17Q6UXB2 119 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 ARNTL2Q8WYA1 636 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 SCLYQ96I15 445 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 FBXL18Q96ME1 805 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 KATNBL1Q9H079 304 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 ABHD16BQ9H3Z7 469 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 ARHGEF10LQ9HCE6 1279 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
DDX39B-209ENST00000428450 TRIOO75962 3097 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 CFAP54Q96N23 3096 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 SLFN5Q08AF3 891 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 GJD3Q8N144 294 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 DDX11Q96FC9 970 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 ANTXR1Q9H6X2 564 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 SH2D4AQ9H788 454 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.17
DDX39B-209ENST00000428450 DBNLQ9UJU6 430 aaKnown RBP13.96□□□□□ -0.17
DDX39B-209ENST00000428450 CABYRO75952 493 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms