RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF697Q5TEC3 545 aa19.81■□□□□ 0.76
VARS-216ENST00000428445 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
VARS-216ENST00000428445 RAVER2Q9HCJ3 691 aaKnown RBP19.81■□□□□ 0.76
VARS-216ENST00000428445 DIS3Q9Y2L1 958 aaKnown RBP19.81■□□□□ 0.76
VARS-216ENST00000428445 A0A1W2PQ45 241 aaPredicted RBP19.8■□□□□ 0.76
VARS-216ENST00000428445 A0A1W2PQY0 241 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 MYADML2A6NDP7 307 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 RNF180Q86T96 592 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 KIFC2Q96AC6 838 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 SEC62Q99442 399 aaKnown RBP19.8■□□□□ 0.76
VARS-216ENST00000428445 CDX2Q99626 313 aaPredicted RBP19.8■□□□□ 0.76
VARS-216ENST00000428445 SEMA6BQ9H3T3 888 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 NYAP2Q9P242 653 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 MCM3APO60318 1980 aa19.8■□□□□ 0.76
VARS-216ENST00000428445 CDH23Q9H251 3354 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 IGKV6D-41A0A0C4DH26 115 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 RNF113AO15541 343 aaKnown RBP19.79■□□□□ 0.76
VARS-216ENST00000428445 GPAA1O43292 621 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 ADAMTS4O75173 837 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 APPP05067 770 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 CLTBP09497 229 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 AKR1A1P14550 325 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 C1orf53Q5VUE5 145 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
VARS-216ENST00000428445 APPBP2Q92624 585 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 DDX11Q96FC9 970 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 COL25A1Q9BXS0 654 aaPredicted RBP19.79■□□□□ 0.76
VARS-216ENST00000428445 TTYH1Q9H313 450 aaPredicted RBP19.79■□□□□ 0.76
VARS-216ENST00000428445 NRBP1Q9UHY1 535 aa19.79■□□□□ 0.76
VARS-216ENST00000428445 ADCY6O43306 1168 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.78■□□□□ 0.762e-6■■■■□ 25.6
VARS-216ENST00000428445 ZNF444Q8N0Y2 327 aaPredicted RBP19.78■□□□□ 0.76
VARS-216ENST00000428445 PRPF38AQ8NAV1 312 aaKnown RBP19.78■□□□□ 0.76
VARS-216ENST00000428445 CEP95Q96GE4 821 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 TEX13BQ9BXU2 312 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 DCTPP1Q9H773 170 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 ZHX1Q9UKY1 873 aaPredicted RBP19.78■□□□□ 0.76
VARS-216ENST00000428445 CNPY2Q9Y2B0 182 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 TACC3Q9Y6A5 838 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 PRUNE2Q8WUY3 3088 aa19.78■□□□□ 0.76
VARS-216ENST00000428445 SYNRGQ9UMZ2 1314 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 DNAJC25-GNG10A0A024R161 153 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 TDO2P48775 406 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 ACLYP53396 1101 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 KCNA10Q16322 511 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 MYLIPQ8WY64 445 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 FGD4Q96M96 766 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 TMEM39AQ9NV64 488 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 CUL9Q8IWT3 2517 aa19.77■□□□□ 0.76
VARS-216ENST00000428445 ZBED4O75132 1171 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 RAG1P15918 1043 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 FAAP100Q0VG06 881 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 GIMAP6Q6P9H5 292 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 IFNL3Q8IZI9 196 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 KLHDC9Q8NEP7 349 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 OTUD7AQ8TE49 926 aaPredicted RBP19.76■□□□□ 0.75
VARS-216ENST00000428445 INCENPQ9NQS7 918 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 MTMR4Q9NYA4 1195 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 FAM184BQ9ULE4 1060 aa19.76■□□□□ 0.75
VARS-216ENST00000428445 ROBO3Q96MS0 1386 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 PATL2C9JE40 543 aaKnown RBP19.75■□□□□ 0.75
VARS-216ENST00000428445 KIAA0355O15063 1070 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 COPB2P35606 906 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 CCSAPQ6IQ19 270 aaPredicted RBP19.75■□□□□ 0.75
VARS-216ENST00000428445 SLC38A10Q9HBR0 1119 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 STARD7Q9NQZ5 370 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 HOMER2Q9NSB8 354 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 CTDP1Q9Y5B0 961 aaPredicted RBP19.75■□□□□ 0.75
VARS-216ENST00000428445 DDX49Q9Y6V7 483 aaKnown RBP19.75■□□□□ 0.75
VARS-216ENST00000428445 VCANP13611 3396 aa19.75■□□□□ 0.75
VARS-216ENST00000428445 PTGS1P23219 599 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 SNAP25P60880 206 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 CNTN2Q02246 1040 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 ACVR2BQ13705 512 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 MAMDC4Q6UXC1 1216 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 ANKRD35Q8N283 1001 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 MKL1Q969V6 931 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 RNPC3Q96LT9 517 aaKnown RBP19.74■□□□□ 0.75
VARS-216ENST00000428445 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.74■□□□□ 0.75
VARS-216ENST00000428445 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
VARS-216ENST00000428445 SYNGAP1Q96PV0 1343 aa19.74■□□□□ 0.75
VARS-216ENST00000428445 SMAD3P84022 425 aaKnown RBP19.73■□□□□ 0.75
VARS-216ENST00000428445 CCDC144BQ3MJ40 725 aa19.73■□□□□ 0.75
VARS-216ENST00000428445 SLFN13Q68D06 897 aa19.73■□□□□ 0.75
VARS-216ENST00000428445 GPATCH3Q96I76 525 aa19.73■□□□□ 0.75
VARS-216ENST00000428445 TSEN34Q9BSV6 310 aaKnown RBP19.73■□□□□ 0.75
VARS-216ENST00000428445 FEM1BQ9UK73 627 aa19.73■□□□□ 0.75
VARS-216ENST00000428445 TMEM232C9JQI7 657 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 ATP2A1O14983 1001 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 TTLL1O95922 423 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 C6orf222P0C671 652 aaPredicted RBP19.72■□□□□ 0.75
VARS-216ENST00000428445 TFAP4Q01664 338 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 FPGSQ05932 587 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 RASGRP2Q7LDG7 609 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 ANKRD33Q7Z3H0 272 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 MSL3Q8N5Y2 521 aaKnown RBP19.72■□□□□ 0.75
VARS-216ENST00000428445 MAFAQ8NHW3 353 aaPredicted RBP19.72■□□□□ 0.75
VARS-216ENST00000428445 VTI1AQ96AJ9 217 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 AGBL1Q96MI9 1066 aa19.72■□□□□ 0.75
VARS-216ENST00000428445 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms